Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
CNTNAP3Q9BZ76 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.83□□□□□ -1.96
CNTNAP3Q9BZ76 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CNTNAP3Q9BZ76 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.82□□□□□ -1.96
CNTNAP3Q9BZ76 RNA5SP425-201ENST00000410336 112 ntBASIC2.82□□□□□ -1.96
CNTNAP3Q9BZ76 RNU6-75P-201ENST00000515944 104 ntBASIC2.82□□□□□ -1.96
CNTNAP3Q9BZ76 RNA5SP137-201ENST00000516833 135 ntBASIC2.82□□□□□ -1.96
CNTNAP3Q9BZ76 RNU6-850P-201ENST00000516934 103 ntBASIC2.82□□□□□ -1.96
CNTNAP3Q9BZ76 AC090897.1-201ENST00000580909 226 ntBASIC2.82□□□□□ -1.96
CNTNAP3Q9BZ76 AC104996.3-201ENST00000590718 94 ntBASIC2.82□□□□□ -1.96
CNTNAP3Q9BZ76 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 Y_RNA.36-201ENST00000362602 112 ntBASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 AC015818.7-201ENST00000428754 109 ntBASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 HSPE1P24-201ENST00000450782 238 ntBASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 AC023790.1-201ENST00000482174 347 ntBASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 RNA5SP385-201ENST00000515947 110 ntBASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 RNA5SP217-201ENST00000515959 91 ntBASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 AC133485.1-201ENST00000567176 124 ntBASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 MIR4498-201ENST00000577599 66 ntBASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 YWHAEP2-201ENST00000580066 112 ntBASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 YWHAEP3-201ENST00000582767 121 ntBASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 MIR4536-1-201ENST00000583537 88 ntBASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 MIR4506-201ENST00000584693 77 ntBASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.81□□□□□ -1.96
CNTNAP3Q9BZ76 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CNTNAP3Q9BZ76 Y_RNA.12-201ENST00000362393 112 ntBASIC2.8□□□□□ -1.96
CNTNAP3Q9BZ76 RNU6-851P-201ENST00000384565 107 ntBASIC2.8□□□□□ -1.96
CNTNAP3Q9BZ76 MIR526A1-201ENST00000384897 85 ntBASIC2.8□□□□□ -1.96
CNTNAP3Q9BZ76 MIR942-201ENST00000401111 86 ntBASIC2.8□□□□□ -1.96
CNTNAP3Q9BZ76 RNU7-26P-201ENST00000458980 63 ntBASIC2.8□□□□□ -1.96
CNTNAP3Q9BZ76 RNU1-143P-201ENST00000516296 146 ntBASIC2.8□□□□□ -1.96
CNTNAP3Q9BZ76 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.8□□□□□ -1.96
CNTNAP3Q9BZ76 MIR5094-201ENST00000578766 85 ntBASIC2.8□□□□□ -1.96
CNTNAP3Q9BZ76 U1.23-201ENST00000610293 146 ntBASIC2.8□□□□□ -1.96
CNTNAP3Q9BZ76 RNU1-68P-201ENST00000615382 146 ntBASIC2.8□□□□□ -1.96
CNTNAP3Q9BZ76 U1.39-201ENST00000621562 146 ntBASIC2.8□□□□□ -1.96
CNTNAP3Q9BZ76 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CNTNAP3Q9BZ76 RNU6-330P-201ENST00000363015 107 ntBASIC2.79□□□□□ -1.96
CNTNAP3Q9BZ76 SNORA8.1-201ENST00000384250 140 ntBASIC2.79□□□□□ -1.96
CNTNAP3Q9BZ76 RNU1-148P-201ENST00000384472 162 ntBASIC2.79□□□□□ -1.96
CNTNAP3Q9BZ76 SNORA72.6-201ENST00000384520 129 ntBASIC2.79□□□□□ -1.96
CNTNAP3Q9BZ76 RNU6-1067P-201ENST00000384752 107 ntBASIC2.79□□□□□ -1.96
CNTNAP3Q9BZ76 SNORD90-201ENST00000391145 111 ntBASIC2.79□□□□□ -1.96
CNTNAP3Q9BZ76 RNA5SP465-201ENST00000391195 109 ntBASIC2.79□□□□□ -1.96
CNTNAP3Q9BZ76 RNU6-630P-201ENST00000391258 106 ntBASIC2.79□□□□□ -1.96
CNTNAP3Q9BZ76 BX510359.4-201ENST00000423750 193 ntBASIC2.79□□□□□ -1.96
CNTNAP3Q9BZ76 AP000942.3-201ENST00000603702 160 ntBASIC2.79□□□□□ -1.96
CNTNAP3Q9BZ76 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.79□□□□□ -1.96
CNTNAP3Q9BZ76 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.79□□□□□ -1.96
CNTNAP3Q9BZ76 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.79□□□□□ -1.96
CNTNAP3Q9BZ76 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 SNORD36A-201ENST00000362874 73 ntBASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 RNU6-571P-201ENST00000384128 107 ntBASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 Y_RNA.491-201ENST00000384417 107 ntBASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 RNU6-1237P-201ENST00000384777 107 ntBASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 MIR518E-201ENST00000385252 88 ntBASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 RNU11-3P-201ENST00000391111 133 ntBASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 AC011753.1-201ENST00000451001 220 ntBASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 SNORA31.26-201ENST00000517250 137 ntBASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 SCARNA20.6-201ENST00000517251 106 ntBASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 AC141846.1-201ENST00000568348 142 ntBASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 AC108206.1-201ENST00000570186 4159 ntBASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.78□□□□□ -1.96
CNTNAP3Q9BZ76 WWP1P1-201ENST00000466609 2769 ntBASIC2.78□□□□□ -1.97
CNTNAP3Q9BZ76 SNORA25.4-201ENST00000363666 124 ntBASIC2.77□□□□□ -1.97
CNTNAP3Q9BZ76 RNU6-614P-201ENST00000384369 107 ntBASIC2.77□□□□□ -1.97
CNTNAP3Q9BZ76 RN7SKP223-201ENST00000410582 62 ntBASIC2.77□□□□□ -1.97
CNTNAP3Q9BZ76 RNA5SP229-201ENST00000410809 99 ntBASIC2.77□□□□□ -1.97
CNTNAP3Q9BZ76 UQCRHP3-201ENST00000451503 251 ntBASIC2.77□□□□□ -1.97
CNTNAP3Q9BZ76 U6.59-201ENST00000615686 107 ntBASIC2.77□□□□□ -1.97
CNTNAP3Q9BZ76 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CNTNAP3Q9BZ76 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CNTNAP3Q9BZ76 RNU6-1031P-201ENST00000384773 107 ntBASIC2.76□□□□□ -1.97
CNTNAP3Q9BZ76 MIR27B-201ENST00000385129 97 ntBASIC2.76□□□□□ -1.97
CNTNAP3Q9BZ76 RN7SKP123-201ENST00000410732 291 ntBASIC2.76□□□□□ -1.97
CNTNAP3Q9BZ76 AC079150.2-201ENST00000443733 78 ntBASIC2.76□□□□□ -1.97
CNTNAP3Q9BZ76 UBBP3-201ENST00000445497 241 ntBASIC2.76□□□□□ -1.97
CNTNAP3Q9BZ76 snoU13.18-201ENST00000459483 104 ntBASIC2.76□□□□□ -1.97
CNTNAP3Q9BZ76 RPS27P21-201ENST00000486977 252 ntBASIC2.76□□□□□ -1.97
CNTNAP3Q9BZ76 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.76□□□□□ -1.97
CNTNAP3Q9BZ76 AL357312.1-201ENST00000603879 298 ntBASIC2.76□□□□□ -1.97
CNTNAP3Q9BZ76 AC022202.1-201ENST00000613515 211 ntBASIC2.76□□□□□ -1.97
CNTNAP3Q9BZ76 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CNTNAP3Q9BZ76 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CNTNAP3Q9BZ76 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CNTNAP3Q9BZ76 RNA5SP289-201ENST00000362332 137 ntBASIC2.75□□□□□ -1.97
CNTNAP3Q9BZ76 SNORD56.5-201ENST00000364281 72 ntBASIC2.75□□□□□ -1.97
CNTNAP3Q9BZ76 SNORD114-30-201ENST00000364448 72 ntBASIC2.75□□□□□ -1.97
CNTNAP3Q9BZ76 Y_RNA.283-201ENST00000364798 112 ntBASIC2.75□□□□□ -1.97
CNTNAP3Q9BZ76 RNU6-669P-201ENST00000365575 107 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms