Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF39Q9H2S5 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF39Q9H2S5 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.07□□□□□ -1.76
RNF39Q9H2S5 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
RNF39Q9H2S5 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RNF39Q9H2S5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF39Q9H2S5 SNORA15B-2-201ENST00000384058 135 ntBASIC4.06□□□□□ -1.76
RNF39Q9H2S5 SNORA15B-1-201ENST00000384334 135 ntBASIC4.06□□□□□ -1.76
RNF39Q9H2S5 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF39Q9H2S5 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF39Q9H2S5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF39Q9H2S5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RNF39Q9H2S5 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
RNF39Q9H2S5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF39Q9H2S5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF39Q9H2S5 RNU6-112P-201ENST00000363599 104 ntBASIC4.05□□□□□ -1.76
RNF39Q9H2S5 RNU6-580P-201ENST00000365159 107 ntBASIC4.05□□□□□ -1.76
RNF39Q9H2S5 RNA5SP306-201ENST00000411087 107 ntBASIC4.05□□□□□ -1.76
RNF39Q9H2S5 PRSS3P4-201ENST00000453323 162 ntBASIC4.05□□□□□ -1.76
RNF39Q9H2S5 AC108206.1-201ENST00000570186 4159 ntBASIC4.05□□□□□ -1.76
RNF39Q9H2S5 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
RNF39Q9H2S5 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
RNF39Q9H2S5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF39Q9H2S5 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF39Q9H2S5 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
RNF39Q9H2S5 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF39Q9H2S5 AL161756.2-201ENST00000604597 246 ntBASIC4.04□□□□□ -1.76
RNF39Q9H2S5 AL137849.1-201ENST00000604767 169 ntBASIC4.04□□□□□ -1.76
RNF39Q9H2S5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF39Q9H2S5 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF39Q9H2S5 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF39Q9H2S5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF39Q9H2S5 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF39Q9H2S5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RNF39Q9H2S5 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RNF39Q9H2S5 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RNF39Q9H2S5 Y_RNA.74-201ENST00000362911 99 ntBASIC4.03□□□□□ -1.76
RNF39Q9H2S5 AC008011.1-201ENST00000545989 227 ntBASIC4.03□□□□□ -1.76
RNF39Q9H2S5 AC020914.4-201ENST00000597690 277 ntBASIC4.03□□□□□ -1.76
RNF39Q9H2S5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RNF39Q9H2S5 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.03□□□□□ -1.76
RNF39Q9H2S5 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RNF39Q9H2S5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF39Q9H2S5 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF39Q9H2S5 RNA5SP383-201ENST00000362934 120 ntBASIC4.02□□□□□ -1.77
RNF39Q9H2S5 SNORA33.1-201ENST00000364957 130 ntBASIC4.02□□□□□ -1.77
RNF39Q9H2S5 MIR519E-201ENST00000385075 84 ntBASIC4.02□□□□□ -1.77
RNF39Q9H2S5 MIR527-201ENST00000385244 85 ntBASIC4.02□□□□□ -1.77
RNF39Q9H2S5 RNA5SP95-201ENST00000410319 137 ntBASIC4.02□□□□□ -1.77
RNF39Q9H2S5 RPS29P4-201ENST00000414733 161 ntBASIC4.02□□□□□ -1.77
RNF39Q9H2S5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.02□□□□□ -1.77
RNF39Q9H2S5 AC012314.7-201ENST00000619693 93 ntBASIC4.02□□□□□ -1.77
RNF39Q9H2S5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RNF39Q9H2S5 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF39Q9H2S5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RNF39Q9H2S5 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF39Q9H2S5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF39Q9H2S5 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF39Q9H2S5 MIR483-201ENST00000385070 76 ntBASIC4.01□□□□□ -1.77
RNF39Q9H2S5 RNA5SP424-201ENST00000390988 115 ntBASIC4.01□□□□□ -1.77
RNF39Q9H2S5 RNU6-548P-201ENST00000517083 115 ntBASIC4.01□□□□□ -1.77
RNF39Q9H2S5 RNU6-711P-201ENST00000517255 106 ntBASIC4.01□□□□□ -1.77
RNF39Q9H2S5 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF39Q9H2S5 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4□□□□□ -1.77
RNF39Q9H2S5 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF39Q9H2S5 LINC02471-203ENST00000641941 4752 ntBASIC4□□□□□ -1.77
RNF39Q9H2S5 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF39Q9H2S5 SNORD1B-201ENST00000363091 84 ntBASIC4□□□□□ -1.77
RNF39Q9H2S5 RNU6-59P-201ENST00000384787 107 ntBASIC4□□□□□ -1.77
RNF39Q9H2S5 RN7SL293P-201ENST00000481765 281 ntBASIC4□□□□□ -1.77
RNF39Q9H2S5 AC019176.2-201ENST00000611579 315 ntBASIC4□□□□□ -1.77
RNF39Q9H2S5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF39Q9H2S5 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF39Q9H2S5 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
RNF39Q9H2S5 SNORD114-4-201ENST00000363962 75 ntBASIC3.99□□□□□ -1.77
RNF39Q9H2S5 RNU6-1008P-201ENST00000384160 104 ntBASIC3.99□□□□□ -1.77
RNF39Q9H2S5 RNU6-246P-201ENST00000384702 107 ntBASIC3.99□□□□□ -1.77
RNF39Q9H2S5 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF39Q9H2S5 RNU6-250P-201ENST00000516958 103 ntBASIC3.99□□□□□ -1.77
RNF39Q9H2S5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF39Q9H2S5 U6.105-201ENST00000637379 88 ntBASIC3.99□□□□□ -1.77
RNF39Q9H2S5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF39Q9H2S5 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RNF39Q9H2S5 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RNF39Q9H2S5 SNORA70.18-201ENST00000516696 98 ntBASIC3.98□□□□□ -1.77
RNF39Q9H2S5 AC022202.1-201ENST00000613515 211 ntBASIC3.98□□□□□ -1.77
RNF39Q9H2S5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF39Q9H2S5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF39Q9H2S5 ZNF658B-202ENST00000615961 3375 ntBASIC3.97□□□□□ -1.77
RNF39Q9H2S5 Y_RNA.282-201ENST00000364793 102 ntBASIC3.97□□□□□ -1.77
RNF39Q9H2S5 MIR490-201ENST00000384865 128 ntBASIC3.97□□□□□ -1.77
RNF39Q9H2S5 RN7SL442P-201ENST00000473804 320 ntBASIC3.97□□□□□ -1.77
RNF39Q9H2S5 AC108210.2-201ENST00000503681 201 ntBASIC3.97□□□□□ -1.77
RNF39Q9H2S5 U3.45-201ENST00000607547 219 ntBASIC3.97□□□□□ -1.77
RNF39Q9H2S5 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF39Q9H2S5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RNF39Q9H2S5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
RNF39Q9H2S5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
RNF39Q9H2S5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
RNF39Q9H2S5 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms