Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 AC007179.3-201ENST00000604976 235 ntBASIC2.48□□□□□ -2.01
LINC00528Q8N1L1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC00528Q8N1L1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC00528Q8N1L1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC00528Q8N1L1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC00528Q8N1L1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
LINC00528Q8N1L1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC00528Q8N1L1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 AL365361.1-201ENST00000566942 3481 ntBASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 AC073325.2-201ENST00000339545 159 ntBASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 RNU4-82P-201ENST00000362443 140 ntBASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 SNORA25.3-201ENST00000363205 127 ntBASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 RNA5SP259-201ENST00000365541 109 ntBASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 RNU6-291P-201ENST00000384720 107 ntBASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 Z98941.1-201ENST00000407764 100 ntBASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 SNORA3.3-201ENST00000408712 125 ntBASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 SNORA70.24-201ENST00000517233 118 ntBASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 MIR4491-201ENST00000581087 68 ntBASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 U3.45-201ENST00000607547 219 ntBASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
LINC00528Q8N1L1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 RNU6-340P-201ENST00000364005 107 ntBASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 Y_RNA.207-201ENST00000364142 106 ntBASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 Y_RNA.371-201ENST00000365591 113 ntBASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 MIR491-201ENST00000384877 84 ntBASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 MIR34B-201ENST00000385076 84 ntBASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 RNA5SP270-201ENST00000411361 118 ntBASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 SNORA9.3-201ENST00000516383 129 ntBASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 RNU6-922P-201ENST00000516753 99 ntBASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 RNU11-2P-201ENST00000516898 142 ntBASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC00528Q8N1L1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 SNORA67.4-201ENST00000384688 142 ntBASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 MIR513A1-201ENST00000385138 129 ntBASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 U8.13-201ENST00000390842 128 ntBASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 Y_RNA.588-201ENST00000391254 102 ntBASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 RNA5SP450-201ENST00000411206 102 ntBASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 TRBV12-2-201ENST00000489763 344 ntBASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 MIR2115-201ENST00000516657 100 ntBASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 U7.8-201ENST00000619968 63 ntBASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LINC00528Q8N1L1 RNA5SP399-201ENST00000364003 117 ntBASIC2.44□□□□□ -2.02
LINC00528Q8N1L1 MIR9-2-201ENST00000384838 87 ntBASIC2.44□□□□□ -2.02
LINC00528Q8N1L1 SNORD100-201ENST00000408573 76 ntBASIC2.44□□□□□ -2.02
LINC00528Q8N1L1 AL035423.1-201ENST00000420331 213 ntBASIC2.44□□□□□ -2.02
LINC00528Q8N1L1 RNU7-195P-201ENST00000458793 62 ntBASIC2.44□□□□□ -2.02
LINC00528Q8N1L1 RPL30P7-201ENST00000479312 323 ntBASIC2.44□□□□□ -2.02
LINC00528Q8N1L1 SNORA74D-201ENST00000516404 141 ntBASIC2.44□□□□□ -2.02
LINC00528Q8N1L1 TRDV1-202ENST00000621643 102 ntBASIC2.44□□□□□ -2.02
LINC00528Q8N1L1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.44□□□□□ -2.02
LINC00528Q8N1L1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
LINC00528Q8N1L1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC00528Q8N1L1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC00528Q8N1L1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
LINC00528Q8N1L1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
LINC00528Q8N1L1 Y_RNA.239-201ENST00000364444 113 ntBASIC2.43□□□□□ -2.02
LINC00528Q8N1L1 RNY4P3-201ENST00000365254 95 ntBASIC2.43□□□□□ -2.02
LINC00528Q8N1L1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.43□□□□□ -2.02
LINC00528Q8N1L1 AL161935.2-201ENST00000414627 60 ntBASIC2.43□□□□□ -2.02
LINC00528Q8N1L1 AL606490.4-201ENST00000423117 127 ntBASIC2.43□□□□□ -2.02
LINC00528Q8N1L1 TRAJ51-201ENST00000504127 63 ntBASIC2.43□□□□□ -2.02
LINC00528Q8N1L1 AL137849.1-201ENST00000604767 169 ntBASIC2.43□□□□□ -2.02
LINC00528Q8N1L1 RNVU1-4-201ENST00000612985 164 ntBASIC2.43□□□□□ -2.02
LINC00528Q8N1L1 ZNF209P-201ENST00000593450 2304 ntBASIC2.43□□□□□ -2.02
LINC00528Q8N1L1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LINC00528Q8N1L1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LINC00528Q8N1L1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
LINC00528Q8N1L1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LINC00528Q8N1L1 SNORD56.5-201ENST00000364281 72 ntBASIC2.42□□□□□ -2.02
LINC00528Q8N1L1 SNORA9-201ENST00000384215 133 ntBASIC2.42□□□□□ -2.02
LINC00528Q8N1L1 Y_RNA.536-201ENST00000384621 113 ntBASIC2.42□□□□□ -2.02
LINC00528Q8N1L1 MIR519A1-201ENST00000385257 85 ntBASIC2.42□□□□□ -2.02
LINC00528Q8N1L1 SNORD93-201ENST00000408813 74 ntBASIC2.42□□□□□ -2.02
LINC00528Q8N1L1 AL159169.1-201ENST00000421119 127 ntBASIC2.42□□□□□ -2.02
LINC00528Q8N1L1 RPS27P16-201ENST00000425758 201 ntBASIC2.42□□□□□ -2.02
LINC00528Q8N1L1 RPS29P31-201ENST00000446147 164 ntBASIC2.42□□□□□ -2.02
LINC00528Q8N1L1 RN7SL274P-201ENST00000492268 272 ntBASIC2.42□□□□□ -2.02
LINC00528Q8N1L1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LINC00528Q8N1L1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LINC00528Q8N1L1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LINC00528Q8N1L1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC00528Q8N1L1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms