Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 RNU6-205P-201ENST00000390858 107 ntBASIC4.73□□□□□ -1.65
NCBP3Q53F19 RNU6-1165P-201ENST00000410119 107 ntBASIC4.73□□□□□ -1.65
NCBP3Q53F19 RNU1-95P-201ENST00000516357 160 ntBASIC4.73□□□□□ -1.65
NCBP3Q53F19 RNU1-128P-201ENST00000516704 160 ntBASIC4.73□□□□□ -1.65
NCBP3Q53F19 AP003355.3-201ENST00000623465 114 ntBASIC4.73□□□□□ -1.65
NCBP3Q53F19 VPS35-212ENST00000640313 141 ntTSL 5 BASIC4.73□□□□□ -1.65
NCBP3Q53F19 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.73□□□□□ -1.65
NCBP3Q53F19 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
NCBP3Q53F19 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.72□□□□□ -1.65
NCBP3Q53F19 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NCBP3Q53F19 RNU6-1123P-201ENST00000362347 106 ntBASIC4.72□□□□□ -1.65
NCBP3Q53F19 Y_RNA.443-201ENST00000384135 111 ntBASIC4.72□□□□□ -1.65
NCBP3Q53F19 SNORA67.4-201ENST00000384688 142 ntBASIC4.72□□□□□ -1.65
NCBP3Q53F19 RNU6-1194P-201ENST00000516208 104 ntBASIC4.72□□□□□ -1.65
NCBP3Q53F19 MIR4738-201ENST00000579134 87 ntBASIC4.72□□□□□ -1.65
NCBP3Q53F19 MIR6075-201ENST00000620782 95 ntBASIC4.72□□□□□ -1.65
NCBP3Q53F19 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.72□□□□□ -1.65
NCBP3Q53F19 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
NCBP3Q53F19 SNORD9-201ENST00000362566 104 ntBASIC4.71□□□□□ -1.66
NCBP3Q53F19 RNY4P3-201ENST00000365254 95 ntBASIC4.71□□□□□ -1.66
NCBP3Q53F19 Y_RNA.333-201ENST00000365274 102 ntBASIC4.71□□□□□ -1.66
NCBP3Q53F19 SNORD111.1-201ENST00000516421 86 ntBASIC4.71□□□□□ -1.66
NCBP3Q53F19 MIR3944-201ENST00000581277 108 ntBASIC4.71□□□□□ -1.66
NCBP3Q53F19 MIR4444-1-201ENST00000581696 74 ntBASIC4.71□□□□□ -1.66
NCBP3Q53F19 MIR4444-2-201ENST00000584390 74 ntBASIC4.71□□□□□ -1.66
NCBP3Q53F19 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.71□□□□□ -1.66
NCBP3Q53F19 AC008739.3-201ENST00000603262 127 ntBASIC4.71□□□□□ -1.66
NCBP3Q53F19 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.71□□□□□ -1.66
NCBP3Q53F19 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NCBP3Q53F19 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NCBP3Q53F19 AC108206.1-201ENST00000570186 4159 ntBASIC4.7□□□□□ -1.66
NCBP3Q53F19 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NCBP3Q53F19 RNU6-681P-201ENST00000364012 104 ntBASIC4.7□□□□□ -1.66
NCBP3Q53F19 SNORA25.16-201ENST00000516741 121 ntBASIC4.7□□□□□ -1.66
NCBP3Q53F19 AC026333.2-201ENST00000542164 106 ntBASIC4.7□□□□□ -1.66
NCBP3Q53F19 AC012314.7-201ENST00000619693 93 ntBASIC4.7□□□□□ -1.66
NCBP3Q53F19 AC009093.8-201ENST00000641769 292 ntBASIC4.7□□□□□ -1.66
NCBP3Q53F19 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NCBP3Q53F19 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NCBP3Q53F19 MIR208A-201ENST00000362287 71 ntBASIC4.69□□□□□ -1.66
NCBP3Q53F19 VTRNA1-1-201ENST00000363120 99 ntBASIC4.69□□□□□ -1.66
NCBP3Q53F19 RNU4-58P-201ENST00000363192 141 ntBASIC4.69□□□□□ -1.66
NCBP3Q53F19 Y_RNA.239-201ENST00000364444 113 ntBASIC4.69□□□□□ -1.66
NCBP3Q53F19 RNU6-53P-201ENST00000365367 106 ntBASIC4.69□□□□□ -1.66
NCBP3Q53F19 RNU6-396P-201ENST00000365369 105 ntBASIC4.69□□□□□ -1.66
NCBP3Q53F19 AL035423.1-201ENST00000420331 213 ntBASIC4.69□□□□□ -1.66
NCBP3Q53F19 RNU2-27P-201ENST00000516185 142 ntBASIC4.69□□□□□ -1.66
NCBP3Q53F19 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.69□□□□□ -1.66
NCBP3Q53F19 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NCBP3Q53F19 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
NCBP3Q53F19 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NCBP3Q53F19 MIR653-201ENST00000385279 96 ntBASIC4.68□□□□□ -1.66
NCBP3Q53F19 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4.68□□□□□ -1.66
NCBP3Q53F19 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NCBP3Q53F19 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.68□□□□□ -1.66
NCBP3Q53F19 RPS29P31-201ENST00000446147 164 ntBASIC4.68□□□□□ -1.66
NCBP3Q53F19 MIR4658-201ENST00000584344 65 ntBASIC4.68□□□□□ -1.66
NCBP3Q53F19 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NCBP3Q53F19 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NCBP3Q53F19 RNA5SP50-201ENST00000363731 107 ntBASIC4.67□□□□□ -1.66
NCBP3Q53F19 RNU6-203P-201ENST00000384038 104 ntBASIC4.67□□□□□ -1.66
NCBP3Q53F19 SNORA5A-201ENST00000384111 134 ntBASIC4.67□□□□□ -1.66
NCBP3Q53F19 HMGN2P35-201ENST00000412164 270 ntBASIC4.67□□□□□ -1.66
NCBP3Q53F19 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.67□□□□□ -1.66
NCBP3Q53F19 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.67□□□□□ -1.66
NCBP3Q53F19 AP000942.3-201ENST00000603702 160 ntBASIC4.67□□□□□ -1.66
NCBP3Q53F19 MIR7851-201ENST00000610611 160 ntBASIC4.67□□□□□ -1.66
NCBP3Q53F19 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
NCBP3Q53F19 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NCBP3Q53F19 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NCBP3Q53F19 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NCBP3Q53F19 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
NCBP3Q53F19 RNU6-881P-201ENST00000516813 102 ntBASIC4.66□□□□□ -1.66
NCBP3Q53F19 AC026403.1-201ENST00000518938 295 ntBASIC4.66□□□□□ -1.66
NCBP3Q53F19 AC006023.1-201ENST00000603944 259 ntBASIC4.66□□□□□ -1.66
NCBP3Q53F19 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.66□□□□□ -1.66
NCBP3Q53F19 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.66□□□□□ -1.66
NCBP3Q53F19 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NCBP3Q53F19 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NCBP3Q53F19 RNU7-195P-201ENST00000458793 62 ntBASIC4.65□□□□□ -1.67
NCBP3Q53F19 RNU7-62P-201ENST00000458856 62 ntBASIC4.65□□□□□ -1.67
NCBP3Q53F19 MIR4491-201ENST00000581087 68 ntBASIC4.65□□□□□ -1.67
NCBP3Q53F19 MIR4264-201ENST00000583520 66 ntBASIC4.65□□□□□ -1.67
NCBP3Q53F19 MIR3140-201ENST00000583685 90 ntBASIC4.65□□□□□ -1.67
NCBP3Q53F19 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NCBP3Q53F19 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NCBP3Q53F19 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NCBP3Q53F19 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
NCBP3Q53F19 SNORA63.1-201ENST00000362493 131 ntBASIC4.64□□□□□ -1.67
NCBP3Q53F19 SNORD45.1-201ENST00000363181 77 ntBASIC4.64□□□□□ -1.67
NCBP3Q53F19 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.64□□□□□ -1.67
NCBP3Q53F19 AL139132.1-201ENST00000431587 344 ntBASIC4.64□□□□□ -1.67
NCBP3Q53F19 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
NCBP3Q53F19 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NCBP3Q53F19 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NCBP3Q53F19 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
NCBP3Q53F19 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.63□□□□□ -1.67
NCBP3Q53F19 MIR7-3-201ENST00000384898 110 ntBASIC4.63□□□□□ -1.67
NCBP3Q53F19 MIR1302-7-201ENST00000408841 72 ntBASIC4.63□□□□□ -1.67
NCBP3Q53F19 RPS27P16-201ENST00000425758 201 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms