Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXB3P14651 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXB3P14651 RNU6-936P-201ENST00000384005 107 ntBASIC3.45□□□□□ -1.86
HOXB3P14651 SNORA44-201ENST00000384584 132 ntBASIC3.45□□□□□ -1.86
HOXB3P14651 MIR520C-201ENST00000385005 87 ntBASIC3.45□□□□□ -1.86
HOXB3P14651 MIR504-201ENST00000385065 83 ntBASIC3.45□□□□□ -1.86
HOXB3P14651 SNORD63B-201ENST00000411005 70 ntBASIC3.45□□□□□ -1.86
HOXB3P14651 snoU13.2-201ENST00000459201 104 ntBASIC3.45□□□□□ -1.86
HOXB3P14651 RNU6-1194P-201ENST00000516208 104 ntBASIC3.45□□□□□ -1.86
HOXB3P14651 SCARNA16.3-201ENST00000516595 184 ntBASIC3.45□□□□□ -1.86
HOXB3P14651 MIR5680-201ENST00000577577 84 ntBASIC3.45□□□□□ -1.86
HOXB3P14651 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXB3P14651 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXB3P14651 RNVU1-4-201ENST00000612985 164 ntBASIC3.45□□□□□ -1.86
HOXB3P14651 U4.6-201ENST00000621618 127 ntBASIC3.45□□□□□ -1.86
HOXB3P14651 SNORA50A-202ENST00000629536 136 ntBASIC3.45□□□□□ -1.86
HOXB3P14651 MIR4251-201ENST00000635819 61 ntBASIC3.45□□□□□ -1.86
HOXB3P14651 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXB3P14651 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HOXB3P14651 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXB3P14651 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXB3P14651 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXB3P14651 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HOXB3P14651 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HOXB3P14651 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HOXB3P14651 RNU1-70P-201ENST00000362618 164 ntBASIC3.44□□□□□ -1.86
HOXB3P14651 AC104389.3-201ENST00000445629 235 ntBASIC3.44□□□□□ -1.86
HOXB3P14651 SNORA4-201ENST00000584302 138 ntBASIC3.44□□□□□ -1.86
HOXB3P14651 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXB3P14651 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXB3P14651 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXB3P14651 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXB3P14651 RNU4-35P-201ENST00000362588 141 ntBASIC3.43□□□□□ -1.86
HOXB3P14651 RNU6-940P-201ENST00000363433 104 ntBASIC3.43□□□□□ -1.86
HOXB3P14651 SNORA24B-201ENST00000384176 131 ntBASIC3.43□□□□□ -1.86
HOXB3P14651 RN7SL594P-201ENST00000470590 287 ntBASIC3.43□□□□□ -1.86
HOXB3P14651 AC026271.5-201ENST00000577873 130 ntBASIC3.43□□□□□ -1.86
HOXB3P14651 MIR4474-201ENST00000579189 78 ntBASIC3.43□□□□□ -1.86
HOXB3P14651 MIR3162-201ENST00000581818 82 ntBASIC3.43□□□□□ -1.86
HOXB3P14651 MIR4435-1-201ENST00000582552 80 ntBASIC3.43□□□□□ -1.86
HOXB3P14651 MIR7851-201ENST00000610611 160 ntBASIC3.43□□□□□ -1.86
HOXB3P14651 AC021506.2-201ENST00000612354 169 ntBASIC3.43□□□□□ -1.86
HOXB3P14651 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXB3P14651 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXB3P14651 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXB3P14651 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXB3P14651 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXB3P14651 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXB3P14651 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXB3P14651 RNU1-58P-201ENST00000362413 163 ntBASIC3.42□□□□□ -1.86
HOXB3P14651 RNA5SP42-201ENST00000364278 115 ntBASIC3.42□□□□□ -1.86
HOXB3P14651 RNU6-1335P-201ENST00000365426 107 ntBASIC3.42□□□□□ -1.86
HOXB3P14651 SNORD17-201ENST00000390930 237 ntBASIC3.42□□□□□ -1.86
HOXB3P14651 RNU2-19P-201ENST00000517288 84 ntBASIC3.42□□□□□ -1.86
HOXB3P14651 MIR466-201ENST00000580653 84 ntBASIC3.42□□□□□ -1.86
HOXB3P14651 AL109933.3-201ENST00000619095 188 ntBASIC3.42□□□□□ -1.86
HOXB3P14651 U4.3-201ENST00000621047 82 ntBASIC3.42□□□□□ -1.86
HOXB3P14651 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXB3P14651 RNU6-542P-201ENST00000516405 103 ntBASIC3.41□□□□□ -1.86
HOXB3P14651 RNA5SP137-201ENST00000516833 135 ntBASIC3.41□□□□□ -1.86
HOXB3P14651 MIR5089-201ENST00000580047 84 ntBASIC3.41□□□□□ -1.86
HOXB3P14651 MIR3140-201ENST00000583685 90 ntBASIC3.41□□□□□ -1.86
HOXB3P14651 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXB3P14651 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXB3P14651 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
HOXB3P14651 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HOXB3P14651 MIR422A-201ENST00000362286 90 ntBASIC3.4□□□□□ -1.87
HOXB3P14651 Y_RNA.118-201ENST00000363300 101 ntBASIC3.4□□□□□ -1.87
HOXB3P14651 SNORA16B-201ENST00000364674 135 ntBASIC3.4□□□□□ -1.87
HOXB3P14651 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HOXB3P14651 RNU6-220P-201ENST00000390919 107 ntBASIC3.4□□□□□ -1.87
HOXB3P14651 HMGN2P35-201ENST00000412164 270 ntBASIC3.4□□□□□ -1.87
HOXB3P14651 RNA5SP356-201ENST00000515972 94 ntBASIC3.4□□□□□ -1.87
HOXB3P14651 RNU1-41P-201ENST00000516161 162 ntBASIC3.4□□□□□ -1.87
HOXB3P14651 RNU1-48P-201ENST00000516400 162 ntBASIC3.4□□□□□ -1.87
HOXB3P14651 MIR4709-201ENST00000577272 72 ntBASIC3.4□□□□□ -1.87
HOXB3P14651 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HOXB3P14651 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXB3P14651 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXB3P14651 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXB3P14651 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HOXB3P14651 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXB3P14651 Y_RNA.164-201ENST00000363709 102 ntBASIC3.39□□□□□ -1.87
HOXB3P14651 RNU6-53P-201ENST00000365367 106 ntBASIC3.39□□□□□ -1.87
HOXB3P14651 MIR588-201ENST00000384900 83 ntBASIC3.39□□□□□ -1.87
HOXB3P14651 MIR29C-201ENST00000385231 88 ntBASIC3.39□□□□□ -1.87
HOXB3P14651 AC011753.1-201ENST00000451001 220 ntBASIC3.39□□□□□ -1.87
HOXB3P14651 RPS29P12-201ENST00000460178 152 ntBASIC3.39□□□□□ -1.87
HOXB3P14651 RNU6-752P-201ENST00000516376 102 ntBASIC3.39□□□□□ -1.87
HOXB3P14651 MIR5004-201ENST00000579078 107 ntBASIC3.39□□□□□ -1.87
HOXB3P14651 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.39□□□□□ -1.87
HOXB3P14651 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXB3P14651 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXB3P14651 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXB3P14651 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXB3P14651 RNA5SP445-201ENST00000515889 115 ntBASIC3.38□□□□□ -1.87
HOXB3P14651 SNORD59.2-201ENST00000516873 68 ntBASIC3.38□□□□□ -1.87
HOXB3P14651 IGKV2-26-201ENST00000518305 343 ntBASIC3.38□□□□□ -1.87
HOXB3P14651 DLEU2_3.2-201ENST00000612883 73 ntBASIC3.38□□□□□ -1.87
HOXB3P14651 AP003355.3-201ENST00000623465 114 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms