Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NPM3O75607 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
NPM3O75607 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
NPM3O75607 SNORD9-201ENST00000362566 104 ntBASIC4.38□□□□□ -1.71
NPM3O75607 MIR218-2-201ENST00000385006 110 ntBASIC4.38□□□□□ -1.71
NPM3O75607 MIR513A1-201ENST00000385138 129 ntBASIC4.38□□□□□ -1.71
NPM3O75607 SNORD41-201ENST00000386967 70 ntBASIC4.38□□□□□ -1.71
NPM3O75607 RNU6-935P-201ENST00000410371 100 ntBASIC4.38□□□□□ -1.71
NPM3O75607 RNA5SP208-201ENST00000516156 78 ntBASIC4.38□□□□□ -1.71
NPM3O75607 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPM3O75607 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPM3O75607 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPM3O75607 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPM3O75607 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NPM3O75607 RNU1-36P-201ENST00000365130 165 ntBASIC4.37□□□□□ -1.71
NPM3O75607 Y_RNA.333-201ENST00000365274 102 ntBASIC4.37□□□□□ -1.71
NPM3O75607 SNORA9-201ENST00000384215 133 ntBASIC4.37□□□□□ -1.71
NPM3O75607 VTRNA2-2P-201ENST00000516091 103 ntBASIC4.37□□□□□ -1.71
NPM3O75607 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
NPM3O75607 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NPM3O75607 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NPM3O75607 MIR633-201ENST00000384821 98 ntBASIC4.36□□□□□ -1.71
NPM3O75607 RNU7-170P-201ENST00000459303 61 ntBASIC4.36□□□□□ -1.71
NPM3O75607 RNU6-922P-201ENST00000516753 99 ntBASIC4.36□□□□□ -1.71
NPM3O75607 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC4.36□□□□□ -1.71
NPM3O75607 MTRNR2L2-201ENST00000604882 87 ntBASIC4.36□□□□□ -1.71
NPM3O75607 U6.100-201ENST00000636230 99 ntBASIC4.36□□□□□ -1.71
NPM3O75607 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPM3O75607 RNU6-824P-201ENST00000363724 104 ntBASIC4.35□□□□□ -1.71
NPM3O75607 RNU6-604P-201ENST00000390917 100 ntBASIC4.35□□□□□ -1.71
NPM3O75607 RNA5SP270-201ENST00000411361 118 ntBASIC4.35□□□□□ -1.71
NPM3O75607 RPL23AP83-201ENST00000434984 473 ntBASIC4.35□□□□□ -1.71
NPM3O75607 RNU6-752P-201ENST00000516376 102 ntBASIC4.35□□□□□ -1.71
NPM3O75607 AC013244.2-201ENST00000603396 103 ntBASIC4.35□□□□□ -1.71
NPM3O75607 MIR7851-201ENST00000610611 160 ntBASIC4.35□□□□□ -1.71
NPM3O75607 AC007318.2-201ENST00000620999 243 ntBASIC4.35□□□□□ -1.71
NPM3O75607 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NPM3O75607 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NPM3O75607 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPM3O75607 SNORA48.8-201ENST00000391324 134 ntBASIC4.34□□□□□ -1.71
NPM3O75607 DLEU2_3.2-201ENST00000612883 73 ntBASIC4.34□□□□□ -1.71
NPM3O75607 uc_338.6-201ENST00000613544 171 ntBASIC4.34□□□□□ -1.71
NPM3O75607 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.34□□□□□ -1.72
NPM3O75607 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPM3O75607 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPM3O75607 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPM3O75607 MIR513A2-201ENST00000385249 127 ntBASIC4.33□□□□□ -1.72
NPM3O75607 U8.13-201ENST00000390842 128 ntBASIC4.33□□□□□ -1.72
NPM3O75607 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.33□□□□□ -1.72
NPM3O75607 AL159169.1-201ENST00000421119 127 ntBASIC4.33□□□□□ -1.72
NPM3O75607 MIR2113-201ENST00000459007 91 ntBASIC4.33□□□□□ -1.72
NPM3O75607 RNU6-274P-201ENST00000459566 107 ntBASIC4.33□□□□□ -1.72
NPM3O75607 AC025445.1-201ENST00000502728 300 ntBASIC4.33□□□□□ -1.72
NPM3O75607 AL161756.2-201ENST00000604597 246 ntBASIC4.33□□□□□ -1.72
NPM3O75607 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPM3O75607 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.33□□□□□ -1.72
NPM3O75607 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
NPM3O75607 LINC02471-203ENST00000641941 4752 ntBASIC4.32□□□□□ -1.72
NPM3O75607 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPM3O75607 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPM3O75607 RNA5SP306-201ENST00000411087 107 ntBASIC4.32□□□□□ -1.72
NPM3O75607 AC097635.1-201ENST00000450678 155 ntBASIC4.32□□□□□ -1.72
NPM3O75607 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.32□□□□□ -1.72
NPM3O75607 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
NPM3O75607 RNU1-33P-201ENST00000364249 162 ntBASIC4.31□□□□□ -1.72
NPM3O75607 RN7SL330P-201ENST00000469709 307 ntBASIC4.31□□□□□ -1.72
NPM3O75607 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.31□□□□□ -1.72
NPM3O75607 RNVU1-4-201ENST00000612985 164 ntBASIC4.31□□□□□ -1.72
NPM3O75607 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPM3O75607 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.31□□□□□ -1.72
NPM3O75607 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.31□□□□□ -1.72
NPM3O75607 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.31□□□□□ -1.72
NPM3O75607 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.3□□□□□ -1.72
NPM3O75607 RNVU1-14-201ENST00000384770 164 ntBASIC4.3□□□□□ -1.72
NPM3O75607 MIR93-201ENST00000385024 80 ntBASIC4.3□□□□□ -1.72
NPM3O75607 MIR451A-201ENST00000385059 72 ntBASIC4.3□□□□□ -1.72
NPM3O75607 MIR23A-201ENST00000385245 73 ntBASIC4.3□□□□□ -1.72
NPM3O75607 SNORA40.6-201ENST00000391153 128 ntBASIC4.3□□□□□ -1.72
NPM3O75607 TRBV12-2-201ENST00000489763 344 ntBASIC4.3□□□□□ -1.72
NPM3O75607 RNU6-579P-201ENST00000516879 102 ntBASIC4.3□□□□□ -1.72
NPM3O75607 AC008011.1-201ENST00000545989 227 ntBASIC4.3□□□□□ -1.72
NPM3O75607 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
NPM3O75607 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NPM3O75607 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NPM3O75607 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
NPM3O75607 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPM3O75607 MIR490-201ENST00000384865 128 ntBASIC4.29□□□□□ -1.72
NPM3O75607 GHRLOS.1-201ENST00000610995 70 ntBASIC4.29□□□□□ -1.72
NPM3O75607 MIR6516-201ENST00000630554 81 ntBASIC4.29□□□□□ -1.72
NPM3O75607 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.29□□□□□ -1.72
NPM3O75607 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NPM3O75607 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NPM3O75607 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NPM3O75607 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NPM3O75607 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC4.28□□□□□ -1.72
NPM3O75607 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
NPM3O75607 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NPM3O75607 MAPK10-373ENST00000641983 6772 ntBASIC4.28□□□□□ -1.72
NPM3O75607 RNU6-1054P-201ENST00000411293 104 ntBASIC4.27□□□□□ -1.73
NPM3O75607 RNU6-1052P-201ENST00000411398 104 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 224.3 ms