Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 HMGN2P39-201ENST00000398005 273 ntBASIC3.12□□□□□ -1.91
RCCD1A6NED2 RNA5SP237-201ENST00000410414 113 ntBASIC3.12□□□□□ -1.91
RCCD1A6NED2 SNORA74D-201ENST00000516404 141 ntBASIC3.12□□□□□ -1.91
RCCD1A6NED2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RCCD1A6NED2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.11□□□□□ -1.91
RCCD1A6NED2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RCCD1A6NED2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RCCD1A6NED2 RNU1-51P-201ENST00000365345 176 ntBASIC3.11□□□□□ -1.91
RCCD1A6NED2 RNU6-129P-201ENST00000391022 107 ntBASIC3.11□□□□□ -1.91
RCCD1A6NED2 RNU4-47P-201ENST00000410876 114 ntBASIC3.11□□□□□ -1.91
RCCD1A6NED2 AC087499.7-201ENST00000441958 109 ntBASIC3.11□□□□□ -1.91
RCCD1A6NED2 MIR3935-201ENST00000583472 104 ntBASIC3.11□□□□□ -1.91
RCCD1A6NED2 MIR8066-201ENST00000617280 78 ntBASIC3.11□□□□□ -1.91
RCCD1A6NED2 U1.36-201ENST00000620684 176 ntBASIC3.11□□□□□ -1.91
RCCD1A6NED2 MIR4251-201ENST00000635819 61 ntBASIC3.11□□□□□ -1.91
RCCD1A6NED2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RCCD1A6NED2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RCCD1A6NED2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RCCD1A6NED2 RNA5SP133-201ENST00000363368 119 ntBASIC3.1□□□□□ -1.91
RCCD1A6NED2 RNU6-525P-201ENST00000363685 104 ntBASIC3.1□□□□□ -1.91
RCCD1A6NED2 RNU1-138P-201ENST00000384093 164 ntBASIC3.1□□□□□ -1.91
RCCD1A6NED2 RNA5SP344-201ENST00000411081 104 ntBASIC3.1□□□□□ -1.91
RCCD1A6NED2 AC141846.1-201ENST00000568348 142 ntBASIC3.1□□□□□ -1.91
RCCD1A6NED2 MIR5680-201ENST00000577577 84 ntBASIC3.1□□□□□ -1.91
RCCD1A6NED2 AP000753.3-201ENST00000604083 169 ntBASIC3.1□□□□□ -1.91
RCCD1A6NED2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RCCD1A6NED2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RCCD1A6NED2 RNY1P2-201ENST00000364820 117 ntBASIC3.09□□□□□ -1.91
RCCD1A6NED2 Y_RNA.545-201ENST00000384652 105 ntBASIC3.09□□□□□ -1.91
RCCD1A6NED2 AC008885.1-201ENST00000514930 301 ntBASIC3.09□□□□□ -1.91
RCCD1A6NED2 RNU6-917P-201ENST00000516294 104 ntBASIC3.09□□□□□ -1.91
RCCD1A6NED2 SNORA25.13-201ENST00000516395 103 ntBASIC3.09□□□□□ -1.91
RCCD1A6NED2 MIR3200-201ENST00000580767 85 ntBASIC3.09□□□□□ -1.91
RCCD1A6NED2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
RCCD1A6NED2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
RCCD1A6NED2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.08□□□□□ -1.92
RCCD1A6NED2 RNU6-1123P-201ENST00000362347 106 ntBASIC3.08□□□□□ -1.92
RCCD1A6NED2 NDUFB4P4-201ENST00000404822 243 ntBASIC3.08□□□□□ -1.92
RCCD1A6NED2 AC027119.1-201ENST00000440877 241 ntBASIC3.08□□□□□ -1.92
RCCD1A6NED2 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.08□□□□□ -1.92
RCCD1A6NED2 RNU7-153P-201ENST00000516455 62 ntBASIC3.08□□□□□ -1.92
RCCD1A6NED2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
RCCD1A6NED2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RCCD1A6NED2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RCCD1A6NED2 AC019129.1-201ENST00000403786 261 ntBASIC3.07□□□□□ -1.92
RCCD1A6NED2 UBBP3-201ENST00000445497 241 ntBASIC3.07□□□□□ -1.92
RCCD1A6NED2 SNORD4B-201ENST00000459083 72 ntBASIC3.07□□□□□ -1.92
RCCD1A6NED2 AL662814.1-201ENST00000617364 121 ntBASIC3.07□□□□□ -1.92
RCCD1A6NED2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RCCD1A6NED2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RCCD1A6NED2 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
RCCD1A6NED2 RNU6-1094P-201ENST00000362416 104 ntBASIC3.06□□□□□ -1.92
RCCD1A6NED2 RNU4-32P-201ENST00000363404 141 ntBASIC3.06□□□□□ -1.92
RCCD1A6NED2 SNORD88.1-201ENST00000408684 91 ntBASIC3.06□□□□□ -1.92
RCCD1A6NED2 AC003982.1-202ENST00000469928 248 ntBASIC3.06□□□□□ -1.92
RCCD1A6NED2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.06□□□□□ -1.92
RCCD1A6NED2 MIR8057-201ENST00000620957 69 ntBASIC3.06□□□□□ -1.92
RCCD1A6NED2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
RCCD1A6NED2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RCCD1A6NED2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RCCD1A6NED2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.05□□□□□ -1.92
RCCD1A6NED2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RCCD1A6NED2 MIR512-1-201ENST00000384913 84 ntBASIC3.05□□□□□ -1.92
RCCD1A6NED2 RNU6-360P-201ENST00000390944 104 ntBASIC3.05□□□□□ -1.92
RCCD1A6NED2 AC090255.1-201ENST00000495779 349 ntBASIC3.05□□□□□ -1.92
RCCD1A6NED2 RNU6-322P-201ENST00000516010 103 ntBASIC3.05□□□□□ -1.92
RCCD1A6NED2 MIR5004-201ENST00000579078 107 ntBASIC3.05□□□□□ -1.92
RCCD1A6NED2 AL512598.1-201ENST00000610158 273 ntBASIC3.05□□□□□ -1.92
RCCD1A6NED2 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.05□□□□□ -1.92
RCCD1A6NED2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RCCD1A6NED2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RCCD1A6NED2 AL161431.1-201ENST00000618966 4205 ntBASIC3.04□□□□□ -1.92
RCCD1A6NED2 RNU6-949P-201ENST00000384040 107 ntBASIC3.04□□□□□ -1.92
RCCD1A6NED2 AC090897.1-201ENST00000580909 226 ntBASIC3.04□□□□□ -1.92
RCCD1A6NED2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.04□□□□□ -1.92
RCCD1A6NED2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RCCD1A6NED2 RNU6-624P-201ENST00000363411 107 ntBASIC3.03□□□□□ -1.92
RCCD1A6NED2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RCCD1A6NED2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
RCCD1A6NED2 Y_RNA.57-201ENST00000362806 113 ntBASIC3.02□□□□□ -1.93
RCCD1A6NED2 RNU6-478P-201ENST00000363904 110 ntBASIC3.02□□□□□ -1.93
RCCD1A6NED2 RNA5SP100-201ENST00000410903 110 ntBASIC3.02□□□□□ -1.93
RCCD1A6NED2 RNA5SP59-201ENST00000410922 110 ntBASIC3.02□□□□□ -1.93
RCCD1A6NED2 SNRPGP12-201ENST00000449481 213 ntBASIC3.02□□□□□ -1.93
RCCD1A6NED2 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.02□□□□□ -1.93
RCCD1A6NED2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.02□□□□□ -1.93
RCCD1A6NED2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.02□□□□□ -1.93
RCCD1A6NED2 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.02□□□□□ -1.93
RCCD1A6NED2 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.02□□□□□ -1.93
RCCD1A6NED2 SNORA50A-202ENST00000629536 136 ntBASIC3.02□□□□□ -1.93
RCCD1A6NED2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RCCD1A6NED2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RCCD1A6NED2 RNA5SP374-201ENST00000362939 125 ntBASIC3.01□□□□□ -1.93
RCCD1A6NED2 MIR653-201ENST00000385279 96 ntBASIC3.01□□□□□ -1.93
RCCD1A6NED2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.01□□□□□ -1.93
RCCD1A6NED2 snoU13.11-201ENST00000459219 104 ntBASIC3.01□□□□□ -1.93
RCCD1A6NED2 RN7SL499P-201ENST00000481141 276 ntBASIC3.01□□□□□ -1.93
RCCD1A6NED2 RPS27P21-201ENST00000486977 252 ntBASIC3.01□□□□□ -1.93
RCCD1A6NED2 RNU7-41P-201ENST00000515917 61 ntBASIC3.01□□□□□ -1.93
RCCD1A6NED2 AC107016.2-201ENST00000547968 190 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms