Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC1.07□□□□□ -2.24
KRTAP4-3Q9BYR4 AC016717.2-201ENST00000609089 5141 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR1-1-201ENST00000362147 71 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORA9.1-201ENST00000362412 131 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 Y_RNA.370-201ENST00000365589 108 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-949P-201ENST00000384040 107 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-163P-201ENST00000384396 106 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-729P-201ENST00000384399 107 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-140P-201ENST00000384566 108 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR634-201ENST00000385208 97 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 U3.27-201ENST00000391237 200 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU2-63P-201ENST00000410792 194 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 COTL1P1-201ENST00000422309 375 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 RPL27AP8-201ENST00000424277 446 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 SUMO1P4-201ENST00000429430 302 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 AC027119.1-201ENST00000440877 241 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 AC108938.1-201ENST00000451204 136 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 UBE2DNL-203ENST00000474922 222 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORA31.1-201ENST00000515993 133 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR449C-201ENST00000516047 92 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORA31.5-201ENST00000516190 133 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR3921-201ENST00000577308 85 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 HMGN2P15-201ENST00000585707 270 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR8055-201ENST00000610739 97 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR4727-201ENST00000622232 55 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 Z97988.1-201ENST00000637697 135 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 AC000123.3-201ENST00000624029 4975 ntBASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP4-3Q9BYR4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 AP003122.5-201ENST00000527668 3766 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-1123P-201ENST00000362347 106 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 Y_RNA.59-201ENST00000362828 102 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-655P-201ENST00000362858 107 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-990P-201ENST00000364385 104 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-828P-201ENST00000364876 107 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 SNORA7.4-201ENST00000384249 137 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-146P-201ENST00000384602 108 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR184-201ENST00000384962 84 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR579-201ENST00000385221 98 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR519A1-201ENST00000385257 85 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR92A2-201ENST00000385299 75 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 MIR1253-201ENST00000408273 105 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 AC079780.1-201ENST00000428259 207 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 HMGN2P34-201ENST00000437647 269 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 HMGN2P10-201ENST00000448085 265 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU7-195P-201ENST00000458793 62 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 RPS27P29-201ENST00000463110 252 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 RN7SL20P-201ENST00000488827 297 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-347P-201ENST00000516658 105 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 RN7SKP277-201ENST00000516895 283 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 FTX_3.1-201ENST00000610451 147 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 AC243994.1-201ENST00000618627 109 ntBASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.05□□□□□ -2.24
KRTAP4-3Q9BYR4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 MFSD8-233ENST00000641482 4860 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 AC073325.2-201ENST00000339545 159 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-1260P-201ENST00000362944 107 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 RNU6-173P-201ENST00000364215 104 ntBASIC1.04□□□□□ -2.24
KRTAP4-3Q9BYR4 Y_RNA.282-201ENST00000364793 102 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms