Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 HSBP1P2-201ENST00000299671 229 ntBASIC3.41□□□□□ -1.86
LRCH3Q96II8 RNU1-70P-201ENST00000362618 164 ntBASIC3.41□□□□□ -1.86
LRCH3Q96II8 Y_RNA.537-201ENST00000384626 109 ntBASIC3.41□□□□□ -1.86
LRCH3Q96II8 RNU6-220P-201ENST00000390919 107 ntBASIC3.41□□□□□ -1.86
LRCH3Q96II8 snoU13.16-201ENST00000459350 104 ntBASIC3.41□□□□□ -1.86
LRCH3Q96II8 RNU6-687P-201ENST00000516443 89 ntBASIC3.41□□□□□ -1.86
LRCH3Q96II8 MIR4484-201ENST00000582855 83 ntBASIC3.41□□□□□ -1.86
LRCH3Q96II8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRCH3Q96II8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.41□□□□□ -1.86
LRCH3Q96II8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LRCH3Q96II8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
LRCH3Q96II8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.41□□□□□ -1.86
LRCH3Q96II8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
LRCH3Q96II8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LRCH3Q96II8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LRCH3Q96II8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
LRCH3Q96II8 Y_RNA.164-201ENST00000363709 102 ntBASIC3.4□□□□□ -1.87
LRCH3Q96II8 Y_RNA.354-201ENST00000365448 111 ntBASIC3.4□□□□□ -1.87
LRCH3Q96II8 RNU1-101P-201ENST00000391171 127 ntBASIC3.4□□□□□ -1.87
LRCH3Q96II8 RNU6-70P-201ENST00000516438 60 ntBASIC3.4□□□□□ -1.87
LRCH3Q96II8 RNA5SP24-201ENST00000516478 95 ntBASIC3.4□□□□□ -1.87
LRCH3Q96II8 AC069114.2-201ENST00000604699 304 ntBASIC3.4□□□□□ -1.87
LRCH3Q96II8 MIR8066-201ENST00000617280 78 ntBASIC3.4□□□□□ -1.87
LRCH3Q96II8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LRCH3Q96II8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LRCH3Q96II8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LRCH3Q96II8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.39□□□□□ -1.87
LRCH3Q96II8 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.39□□□□□ -1.87
LRCH3Q96II8 RNA5SP99-201ENST00000364020 114 ntBASIC3.39□□□□□ -1.87
LRCH3Q96II8 RNU6-1019P-201ENST00000364424 107 ntBASIC3.39□□□□□ -1.87
LRCH3Q96II8 MIR196B-201ENST00000384852 84 ntBASIC3.39□□□□□ -1.87
LRCH3Q96II8 AC108210.2-201ENST00000503681 201 ntBASIC3.39□□□□□ -1.87
LRCH3Q96II8 FGF7P7-201ENST00000514120 227 ntBASIC3.39□□□□□ -1.87
LRCH3Q96II8 Y_RNA.660-201ENST00000516002 120 ntBASIC3.39□□□□□ -1.87
LRCH3Q96II8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.39□□□□□ -1.87
LRCH3Q96II8 AL512598.1-201ENST00000610158 273 ntBASIC3.39□□□□□ -1.87
LRCH3Q96II8 Z97988.1-201ENST00000637697 135 ntBASIC3.39□□□□□ -1.87
LRCH3Q96II8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LRCH3Q96II8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LRCH3Q96II8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.39□□□□□ -1.87
LRCH3Q96II8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRCH3Q96II8 AL021368.2-201ENST00000606125 5352 ntBASIC3.38□□□□□ -1.87
LRCH3Q96II8 RNU6-649P-201ENST00000384463 107 ntBASIC3.38□□□□□ -1.87
LRCH3Q96II8 RNU6-987P-201ENST00000384759 104 ntBASIC3.38□□□□□ -1.87
LRCH3Q96II8 MIR526A1-201ENST00000384897 85 ntBASIC3.38□□□□□ -1.87
LRCH3Q96II8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LRCH3Q96II8 RNU6-482P-201ENST00000391068 107 ntBASIC3.38□□□□□ -1.87
LRCH3Q96II8 ARF4P2-201ENST00000430209 526 ntBASIC3.38□□□□□ -1.87
LRCH3Q96II8 AL591806.2-201ENST00000433122 173 ntBASIC3.38□□□□□ -1.87
LRCH3Q96II8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.38□□□□□ -1.87
LRCH3Q96II8 SNORD53-201ENST00000579969 78 ntBASIC3.38□□□□□ -1.87
LRCH3Q96II8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LRCH3Q96II8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
LRCH3Q96II8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.38□□□□□ -1.87
LRCH3Q96II8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRCH3Q96II8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRCH3Q96II8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRCH3Q96II8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRCH3Q96II8 MIR635-201ENST00000384830 98 ntBASIC3.37□□□□□ -1.87
LRCH3Q96II8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LRCH3Q96II8 RNU2-59P-201ENST00000410482 191 ntBASIC3.37□□□□□ -1.87
LRCH3Q96II8 RNU4-83P-201ENST00000410863 133 ntBASIC3.37□□□□□ -1.87
LRCH3Q96II8 AL513328.1-201ENST00000446460 224 ntBASIC3.37□□□□□ -1.87
LRCH3Q96II8 RPL23AP6-201ENST00000446637 472 ntBASIC3.37□□□□□ -1.87
LRCH3Q96II8 Y_RNA.681-201ENST00000516445 113 ntBASIC3.37□□□□□ -1.87
LRCH3Q96II8 AC079600.2-201ENST00000550076 130 ntBASIC3.37□□□□□ -1.87
LRCH3Q96II8 DEFB122-202ENST00000569013 197 ntBASIC3.37□□□□□ -1.87
LRCH3Q96II8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
LRCH3Q96II8 XIST_intron.1-201ENST00000619444 68 ntBASIC3.37□□□□□ -1.87
LRCH3Q96II8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRCH3Q96II8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRCH3Q96II8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRCH3Q96II8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRCH3Q96II8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LRCH3Q96II8 RNY1P13-201ENST00000365030 105 ntBASIC3.36□□□□□ -1.87
LRCH3Q96II8 RN7SL442P-201ENST00000473804 320 ntBASIC3.36□□□□□ -1.87
LRCH3Q96II8 RPS29P11-201ENST00000496507 171 ntBASIC3.36□□□□□ -1.87
LRCH3Q96II8 SNORD14A-201ENST00000606526 91 ntBASIC3.36□□□□□ -1.87
LRCH3Q96II8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
LRCH3Q96II8 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRCH3Q96II8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRCH3Q96II8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LRCH3Q96II8 SNORA25.9-201ENST00000365087 128 ntBASIC3.35□□□□□ -1.87
LRCH3Q96II8 RNU6-1031P-201ENST00000384773 107 ntBASIC3.35□□□□□ -1.87
LRCH3Q96II8 RNU4-37P-201ENST00000410214 84 ntBASIC3.35□□□□□ -1.87
LRCH3Q96II8 SNORD109B-201ENST00000458961 67 ntBASIC3.35□□□□□ -1.87
LRCH3Q96II8 SNORD109A-201ENST00000459128 67 ntBASIC3.35□□□□□ -1.87
LRCH3Q96II8 AC005786.1-201ENST00000588553 154 ntBASIC3.35□□□□□ -1.87
LRCH3Q96II8 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LRCH3Q96II8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRCH3Q96II8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRCH3Q96II8 AC009487.2-201ENST00000420969 6821 ntBASIC3.34□□□□□ -1.87
LRCH3Q96II8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
LRCH3Q96II8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRCH3Q96II8 RNU6-950P-201ENST00000384651 107 ntBASIC3.34□□□□□ -1.87
LRCH3Q96II8 RNU6-1067P-201ENST00000384752 107 ntBASIC3.34□□□□□ -1.87
LRCH3Q96II8 RNU6-1237P-201ENST00000384777 107 ntBASIC3.34□□□□□ -1.87
LRCH3Q96II8 RNA5SP292-201ENST00000390974 118 ntBASIC3.34□□□□□ -1.87
LRCH3Q96II8 Y_RNA.648-201ENST00000459455 110 ntBASIC3.34□□□□□ -1.87
LRCH3Q96II8 RNU6-807P-201ENST00000516805 107 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms