Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
ATN1P54259 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.88□□□□□ -1.79
ATN1P54259 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ATN1P54259 Y_RNA.119-201ENST00000363301 96 ntBASIC3.88□□□□□ -1.79
ATN1P54259 MIR660-201ENST00000385235 97 ntBASIC3.88□□□□□ -1.79
ATN1P54259 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.88□□□□□ -1.79
ATN1P54259 SNORA70.19-201ENST00000516717 90 ntBASIC3.88□□□□□ -1.79
ATN1P54259 MIR3169-201ENST00000578032 83 ntBASIC3.88□□□□□ -1.79
ATN1P54259 MIR486-1-201ENST00000612171 68 ntBASIC3.88□□□□□ -1.79
ATN1P54259 AC244205.2-202ENST00000635781 342 ntBASIC3.88□□□□□ -1.79
ATN1P54259 U6.109-201ENST00000636749 87 ntBASIC3.88□□□□□ -1.79
ATN1P54259 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATN1P54259 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.88□□□□□ -1.79
ATN1P54259 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATN1P54259 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.88□□□□□ -1.79
ATN1P54259 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATN1P54259 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
ATN1P54259 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
ATN1P54259 AC093908.1-201ENST00000623125 8092 ntBASIC3.87□□□□□ -1.79
ATN1P54259 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATN1P54259 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATN1P54259 RNU6-957P-201ENST00000363652 99 ntBASIC3.87□□□□□ -1.79
ATN1P54259 MIR526A1-201ENST00000384897 85 ntBASIC3.87□□□□□ -1.79
ATN1P54259 RNU1-101P-201ENST00000391171 127 ntBASIC3.87□□□□□ -1.79
ATN1P54259 RNU2-37P-201ENST00000410695 177 ntBASIC3.87□□□□□ -1.79
ATN1P54259 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.87□□□□□ -1.79
ATN1P54259 MIR5004-201ENST00000579078 107 ntBASIC3.87□□□□□ -1.79
ATN1P54259 MIR4276-201ENST00000584832 70 ntBASIC3.87□□□□□ -1.79
ATN1P54259 AP003355.3-201ENST00000623465 114 ntBASIC3.87□□□□□ -1.79
ATN1P54259 MIR7515-201ENST00000637837 67 ntBASIC3.87□□□□□ -1.79
ATN1P54259 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.87□□□□□ -1.79
ATN1P54259 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
ATN1P54259 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.86□□□□□ -1.79
ATN1P54259 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.86□□□□□ -1.79
ATN1P54259 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.86□□□□□ -1.79
ATN1P54259 SNORA74.3-201ENST00000517108 154 ntBASIC3.86□□□□□ -1.79
ATN1P54259 UBL5P2-201ENST00000583788 219 ntBASIC3.86□□□□□ -1.79
ATN1P54259 AL109933.3-201ENST00000619095 188 ntBASIC3.86□□□□□ -1.79
ATN1P54259 IPO8P1-201ENST00000455509 3109 ntBASIC3.86□□□□□ -1.79
ATN1P54259 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATN1P54259 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATN1P54259 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATN1P54259 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ATN1P54259 RNU6-604P-201ENST00000390917 100 ntBASIC3.85□□□□□ -1.79
ATN1P54259 RN7SKP220-201ENST00000410611 288 ntBASIC3.85□□□□□ -1.79
ATN1P54259 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.85□□□□□ -1.79
ATN1P54259 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ATN1P54259 AL021368.2-201ENST00000606125 5352 ntBASIC3.85□□□□□ -1.79
ATN1P54259 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ATN1P54259 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
ATN1P54259 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ATN1P54259 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ATN1P54259 MIR422A-201ENST00000362286 90 ntBASIC3.84□□□□□ -1.79
ATN1P54259 AC097510.1-201ENST00000510945 133 ntBASIC3.84□□□□□ -1.79
ATN1P54259 RNU7-43P-201ENST00000516554 64 ntBASIC3.84□□□□□ -1.79
ATN1P54259 MIR466-201ENST00000580653 84 ntBASIC3.84□□□□□ -1.79
ATN1P54259 AC006023.1-201ENST00000603944 259 ntBASIC3.84□□□□□ -1.79
ATN1P54259 AC008133.2-201ENST00000624540 351 ntBASIC3.84□□□□□ -1.79
ATN1P54259 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
ATN1P54259 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
ATN1P54259 ZNF209P-201ENST00000593450 2304 ntBASIC3.84□□□□□ -1.79
ATN1P54259 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ATN1P54259 RNU6-23P-201ENST00000363283 107 ntBASIC3.83□□□□□ -1.8
ATN1P54259 SNORA5B-201ENST00000363786 132 ntBASIC3.83□□□□□ -1.8
ATN1P54259 RNU6-301P-201ENST00000384277 107 ntBASIC3.83□□□□□ -1.8
ATN1P54259 RNU6-1031P-201ENST00000384773 107 ntBASIC3.83□□□□□ -1.8
ATN1P54259 RN7SL330P-201ENST00000469709 307 ntBASIC3.83□□□□□ -1.8
ATN1P54259 AL033523.1-201ENST00000605153 153 ntBASIC3.83□□□□□ -1.8
ATN1P54259 U6.81-201ENST00000612550 106 ntBASIC3.83□□□□□ -1.8
ATN1P54259 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ATN1P54259 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATN1P54259 RNU6-446P-201ENST00000362827 106 ntBASIC3.82□□□□□ -1.8
ATN1P54259 RNU6-940P-201ENST00000363433 104 ntBASIC3.82□□□□□ -1.8
ATN1P54259 Y_RNA.239-201ENST00000364444 113 ntBASIC3.82□□□□□ -1.8
ATN1P54259 SNORA25B-201ENST00000365507 128 ntBASIC3.82□□□□□ -1.8
ATN1P54259 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ATN1P54259 AL023284.1-201ENST00000403956 276 ntBASIC3.82□□□□□ -1.8
ATN1P54259 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.82□□□□□ -1.8
ATN1P54259 AL096861.1-201ENST00000610899 123 ntBASIC3.82□□□□□ -1.8
ATN1P54259 MIR7106-201ENST00000612419 65 ntBASIC3.82□□□□□ -1.8
ATN1P54259 AC022513.1-201ENST00000624512 117 ntBASIC3.82□□□□□ -1.8
ATN1P54259 AC110079.1-202ENST00000635213 138 ntBASIC3.82□□□□□ -1.8
ATN1P54259 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.82□□□□□ -1.8
ATN1P54259 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATN1P54259 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.82□□□□□ -1.8
ATN1P54259 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATN1P54259 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATN1P54259 AC019129.1-201ENST00000403786 261 ntBASIC3.81□□□□□ -1.8
ATN1P54259 RPS27P16-201ENST00000425758 201 ntBASIC3.81□□□□□ -1.8
ATN1P54259 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.81□□□□□ -1.8
ATN1P54259 RNU7-106P-201ENST00000459514 67 ntBASIC3.81□□□□□ -1.8
ATN1P54259 MIR3186-201ENST00000577404 85 ntBASIC3.81□□□□□ -1.8
ATN1P54259 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
ATN1P54259 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
ATN1P54259 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATN1P54259 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATN1P54259 RNA5SP126-201ENST00000365092 109 ntBASIC3.8□□□□□ -1.8
ATN1P54259 RNU1-109P-201ENST00000383960 147 ntBASIC3.8□□□□□ -1.8
ATN1P54259 RNU6-1057P-201ENST00000517162 102 ntBASIC3.8□□□□□ -1.8
ATN1P54259 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 250 ms