Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUBP1P53384 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
NUBP1P53384 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.7□□□□□ -1.82
NUBP1P53384 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUBP1P53384 RNA5SP48-201ENST00000363969 126 ntBASIC3.7□□□□□ -1.82
NUBP1P53384 RNA5SP126-201ENST00000365092 109 ntBASIC3.7□□□□□ -1.82
NUBP1P53384 SNORA8.1-201ENST00000384250 140 ntBASIC3.7□□□□□ -1.82
NUBP1P53384 RNU6-987P-201ENST00000384759 104 ntBASIC3.7□□□□□ -1.82
NUBP1P53384 RNU6-75P-201ENST00000515944 104 ntBASIC3.7□□□□□ -1.82
NUBP1P53384 MIR5680-201ENST00000577577 84 ntBASIC3.7□□□□□ -1.82
NUBP1P53384 UBL5P2-201ENST00000583788 219 ntBASIC3.7□□□□□ -1.82
NUBP1P53384 U7.8-201ENST00000619968 63 ntBASIC3.7□□□□□ -1.82
NUBP1P53384 AC006386.2-201ENST00000624491 75 ntBASIC3.7□□□□□ -1.82
NUBP1P53384 AC012005.1-201ENST00000624575 75 ntBASIC3.7□□□□□ -1.82
NUBP1P53384 MIR664A-201ENST00000626086 82 ntBASIC3.7□□□□□ -1.82
NUBP1P53384 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NUBP1P53384 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NUBP1P53384 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
NUBP1P53384 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
NUBP1P53384 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NUBP1P53384 RNU1-51P-201ENST00000365345 176 ntBASIC3.69□□□□□ -1.82
NUBP1P53384 RNU6-1241P-201ENST00000384536 107 ntBASIC3.69□□□□□ -1.82
NUBP1P53384 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NUBP1P53384 RNU7-41P-201ENST00000515917 61 ntBASIC3.69□□□□□ -1.82
NUBP1P53384 AC104027.1-201ENST00000521887 300 ntBASIC3.69□□□□□ -1.82
NUBP1P53384 MIR4672-201ENST00000583126 81 ntBASIC3.69□□□□□ -1.82
NUBP1P53384 AL162274.2-201ENST00000614406 332 ntBASIC3.69□□□□□ -1.82
NUBP1P53384 U1.36-201ENST00000620684 176 ntBASIC3.69□□□□□ -1.82
NUBP1P53384 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NUBP1P53384 AL365361.1-201ENST00000566942 3481 ntBASIC3.68□□□□□ -1.82
NUBP1P53384 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.68□□□□□ -1.82
NUBP1P53384 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NUBP1P53384 RNU1-15P-201ENST00000353977 144 ntBASIC3.68□□□□□ -1.82
NUBP1P53384 SNORA67.4-201ENST00000384688 142 ntBASIC3.68□□□□□ -1.82
NUBP1P53384 RNA5SP424-201ENST00000390988 115 ntBASIC3.68□□□□□ -1.82
NUBP1P53384 RNU6-663P-201ENST00000391105 106 ntBASIC3.68□□□□□ -1.82
NUBP1P53384 RNA5SP501-201ENST00000410990 112 ntBASIC3.68□□□□□ -1.82
NUBP1P53384 AC244023.1-201ENST00000426884 112 ntBASIC3.68□□□□□ -1.82
NUBP1P53384 AC242498.1-201ENST00000604134 111 ntBASIC3.68□□□□□ -1.82
NUBP1P53384 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.68□□□□□ -1.82
NUBP1P53384 AP000553.6-201ENST00000641242 118 ntBASIC3.68□□□□□ -1.82
NUBP1P53384 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUBP1P53384 RNU4-37P-201ENST00000410214 84 ntBASIC3.67□□□□□ -1.82
NUBP1P53384 RN7SKP220-201ENST00000410611 288 ntBASIC3.67□□□□□ -1.82
NUBP1P53384 MIR7106-201ENST00000612419 65 ntBASIC3.67□□□□□ -1.82
NUBP1P53384 MAPK10-362ENST00000641864 4484 ntBASIC3.67□□□□□ -1.82
NUBP1P53384 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUBP1P53384 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
NUBP1P53384 RNA5SP374-201ENST00000362939 125 ntBASIC3.66□□□□□ -1.82
NUBP1P53384 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NUBP1P53384 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NUBP1P53384 MTND4LP19-201ENST00000403051 166 ntBASIC3.66□□□□□ -1.82
NUBP1P53384 RNA5SP445-201ENST00000515889 115 ntBASIC3.66□□□□□ -1.82
NUBP1P53384 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NUBP1P53384 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUBP1P53384 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.66□□□□□ -1.82
NUBP1P53384 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUBP1P53384 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.66□□□□□ -1.82
NUBP1P53384 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NUBP1P53384 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
NUBP1P53384 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
NUBP1P53384 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NUBP1P53384 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NUBP1P53384 MIR563-201ENST00000385080 79 ntBASIC3.65□□□□□ -1.83
NUBP1P53384 MIR518E-201ENST00000385252 88 ntBASIC3.65□□□□□ -1.83
NUBP1P53384 RNU6-360P-201ENST00000390944 104 ntBASIC3.65□□□□□ -1.83
NUBP1P53384 RNU4-47P-201ENST00000410876 114 ntBASIC3.65□□□□□ -1.83
NUBP1P53384 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.65□□□□□ -1.83
NUBP1P53384 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NUBP1P53384 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NUBP1P53384 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.64□□□□□ -1.83
NUBP1P53384 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
NUBP1P53384 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUBP1P53384 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUBP1P53384 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
NUBP1P53384 MIRLET7F1-201ENST00000362202 87 ntBASIC3.64□□□□□ -1.83
NUBP1P53384 RNU4-35P-201ENST00000362588 141 ntBASIC3.64□□□□□ -1.83
NUBP1P53384 RNU6-53P-201ENST00000365367 106 ntBASIC3.64□□□□□ -1.83
NUBP1P53384 SNORA31.15-201ENST00000516771 132 ntBASIC3.64□□□□□ -1.83
NUBP1P53384 DEFB122-202ENST00000569013 197 ntBASIC3.64□□□□□ -1.83
NUBP1P53384 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.64□□□□□ -1.83
NUBP1P53384 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.64□□□□□ -1.83
NUBP1P53384 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.64□□□□□ -1.83
NUBP1P53384 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
NUBP1P53384 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NUBP1P53384 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.64□□□□□ -1.83
NUBP1P53384 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUBP1P53384 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NUBP1P53384 AC093010.3-201ENST00000570269 15214 ntBASIC3.63□□□□□ -1.83
NUBP1P53384 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
NUBP1P53384 RNU6-396P-201ENST00000365369 105 ntBASIC3.63□□□□□ -1.83
NUBP1P53384 MIR653-201ENST00000385279 96 ntBASIC3.63□□□□□ -1.83
NUBP1P53384 HLA-N-201ENST00000437516 135 ntBASIC3.63□□□□□ -1.83
NUBP1P53384 PRELID3BP2-201ENST00000605362 201 ntBASIC3.63□□□□□ -1.83
NUBP1P53384 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
NUBP1P53384 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
NUBP1P53384 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
NUBP1P53384 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NUBP1P53384 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NUBP1P53384 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms