Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RNA5SP124-201ENST00000362739 110 ntBASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 RNA5SP132-201ENST00000364725 118 ntBASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 SNORA67.3-201ENST00000384366 140 ntBASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 RN7SL97P-201ENST00000486780 299 ntBASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 RPS21P4-201ENST00000487122 248 ntBASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 SNORD95-201ENST00000579879 68 ntBASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 FAM27B-201ENST00000610601 213 ntBASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 AL157834.3-201ENST00000615543 103 ntBASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 AC140113.4-201ENST00000622087 222 ntBASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 U2.18-201ENST00000622185 84 ntBASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP3-3Q9BYR6 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP3-3Q9BYR6 SNORA7.1-201ENST00000363750 139 ntBASIC2.36□□□□□ -2.03
KRTAP3-3Q9BYR6 RNU6-598P-201ENST00000364017 105 ntBASIC2.36□□□□□ -2.03
KRTAP3-3Q9BYR6 SNORA8.2-201ENST00000384372 139 ntBASIC2.36□□□□□ -2.03
KRTAP3-3Q9BYR6 RN7SL649P-201ENST00000496974 275 ntBASIC2.36□□□□□ -2.03
KRTAP3-3Q9BYR6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KRTAP3-3Q9BYR6 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
KRTAP3-3Q9BYR6 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC2.36□□□□□ -2.03
KRTAP3-3Q9BYR6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 Y_RNA.139-201ENST00000363464 102 ntBASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 Y_RNA.500-201ENST00000384466 111 ntBASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 MIR548AA1-201ENST00000384971 97 ntBASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 MIR921-201ENST00000401133 56 ntBASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 CYCSP4-201ENST00000429682 331 ntBASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 AC092427.1-202ENST00000430569 476 ntBASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 RN7SL244P-201ENST00000493405 297 ntBASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 AC243829.6-201ENST00000612652 106 ntBASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 MIR6837-201ENST00000620884 64 ntBASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
KRTAP3-3Q9BYR6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 RNA5SP372-201ENST00000390836 115 ntBASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 RNA5SP446-201ENST00000515955 82 ntBASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 AC011447.4-201ENST00000587562 111 ntBASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 5S_rRNA.16-201ENST00000612928 119 ntBASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 AC244669.1-204ENST00000621564 178 ntBASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 AC019206.1-201ENST00000621938 425 ntBASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 AC015813.6-201ENST00000624409 5808 ntBASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC2.34□□□□□ -2.03
KRTAP3-3Q9BYR6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.34□□□□□ -2.04
KRTAP3-3Q9BYR6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
KRTAP3-3Q9BYR6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
KRTAP3-3Q9BYR6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 MAPK10-266ENST00000641066 6555 ntBASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 RNU6-726P-201ENST00000364680 107 ntBASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 RNA5SP151-201ENST00000365632 117 ntBASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 SNORA70-201ENST00000384436 135 ntBASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 RN7SKP206-201ENST00000410823 293 ntBASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 AC004975.1-201ENST00000428733 208 ntBASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 RNA5SP362-201ENST00000516048 118 ntBASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 MIR4691-201ENST00000583764 85 ntBASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 MIR4317-201ENST00000637586 65 ntBASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 AC005005.4-201ENST00000623789 16698 ntBASIC2.33□□□□□ -2.04
KRTAP3-3Q9BYR6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 RNA5SP242-201ENST00000364171 118 ntBASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 RNA5SP146-201ENST00000410743 123 ntBASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 RNA5SP450-201ENST00000411206 102 ntBASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 RNA5SP484-201ENST00000458857 111 ntBASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 RN7SL319P-201ENST00000480656 221 ntBASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 MIR5699-201ENST00000578903 90 ntBASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 MIR5194-201ENST00000582634 120 ntBASIC2.32□□□□□ -2.04
KRTAP3-3Q9BYR6 IMMP1LP3-201ENST00000604197 224 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms