Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-11Q9BYQ6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 IARS-213ENST00000627121 4587 ntTSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 MIR20A-201ENST00000362279 71 ntBASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNA5SP259-201ENST00000365541 109 ntBASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNA5SP397-201ENST00000391323 118 ntBASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNU6-628P-201ENST00000410675 107 ntBASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 AC083863.1-201ENST00000438811 231 ntBASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 RPL23AP94-201ENST00000512518 302 ntBASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNU6-135P-201ENST00000516769 101 ntBASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNA5SP47-201ENST00000517230 109 ntBASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 MIR4804-201ENST00000581683 73 ntBASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 GHRLOS.1-201ENST00000610995 70 ntBASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 AL157834.3-201ENST00000615543 103 ntBASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 AC084768.2-201ENST00000622736 221 ntBASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 MIR492-201ENST00000638676 116 ntBASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-11Q9BYQ6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNA5SP90-201ENST00000364801 99 ntBASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 MIR194-1-201ENST00000384892 85 ntBASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 MIR656-201ENST00000385224 78 ntBASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 MIR548Q-201ENST00000408404 100 ntBASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNU6ATAC-201ENST00000408749 126 ntBASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNU6-321P-201ENST00000410912 106 ntBASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 RN7SKP17-201ENST00000411242 351 ntBASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 RNU7-56P-201ENST00000458744 62 ntBASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
KRTAP4-11Q9BYQ6 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC1.34□□□□□ -2.2
KRTAP4-11Q9BYQ6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-11Q9BYQ6 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.2
KRTAP4-11Q9BYQ6 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC1.34□□□□□ -2.2
KRTAP4-11Q9BYQ6 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC1.34□□□□□ -2.2
KRTAP4-11Q9BYQ6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-11Q9BYQ6 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-11Q9BYQ6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-11Q9BYQ6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 Z82217.1-201ENST00000625157 8149 ntBASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 MUC2-202ENST00000613187 4845 ntBASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 RNA5SP432-201ENST00000362480 116 ntBASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 RNA5SP119-201ENST00000362715 117 ntBASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 RNA5SP283-201ENST00000365604 119 ntBASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 AC006210.1-201ENST00000424882 111 ntBASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 SCARNA10-201ENST00000459255 330 ntBASIC1.33□□□□□ -2.2
KRTAP4-11Q9BYQ6 RN7SL814P-201ENST00000487715 300 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms