Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
RNF223E7ERA6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3□□□□□ -1.93
RNF223E7ERA6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3□□□□□ -1.93
RNF223E7ERA6 SNORA25.4-201ENST00000363666 124 ntBASIC3□□□□□ -1.93
RNF223E7ERA6 RNU6-283P-201ENST00000364788 107 ntBASIC3□□□□□ -1.93
RNF223E7ERA6 RNU1-89P-201ENST00000384592 164 ntBASIC3□□□□□ -1.93
RNF223E7ERA6 MIR516A2-201ENST00000384888 90 ntBASIC3□□□□□ -1.93
RNF223E7ERA6 MIR516A1-201ENST00000385033 90 ntBASIC3□□□□□ -1.93
RNF223E7ERA6 MIR708-201ENST00000390708 88 ntBASIC3□□□□□ -1.93
RNF223E7ERA6 SNORD90-201ENST00000391145 111 ntBASIC3□□□□□ -1.93
RNF223E7ERA6 AC020914.4-201ENST00000597690 277 ntBASIC3□□□□□ -1.93
RNF223E7ERA6 U4.6-201ENST00000621618 127 ntBASIC3□□□□□ -1.93
RNF223E7ERA6 U6.109-201ENST00000636749 87 ntBASIC3□□□□□ -1.93
RNF223E7ERA6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
RNF223E7ERA6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3□□□□□ -1.93
RNF223E7ERA6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
RNF223E7ERA6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
RNF223E7ERA6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RNF223E7ERA6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RNF223E7ERA6 MIRLET7F1-201ENST00000362202 87 ntBASIC2.99□□□□□ -1.93
RNF223E7ERA6 RNU6-330P-201ENST00000363015 107 ntBASIC2.99□□□□□ -1.93
RNF223E7ERA6 Y_RNA.119-201ENST00000363301 96 ntBASIC2.99□□□□□ -1.93
RNF223E7ERA6 MIR518E-201ENST00000385252 88 ntBASIC2.99□□□□□ -1.93
RNF223E7ERA6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
RNF223E7ERA6 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RNF223E7ERA6 AC011753.1-201ENST00000451001 220 ntBASIC2.99□□□□□ -1.93
RNF223E7ERA6 RPS29P12-201ENST00000460178 152 ntBASIC2.99□□□□□ -1.93
RNF223E7ERA6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF223E7ERA6 MIR4709-201ENST00000577272 72 ntBASIC2.99□□□□□ -1.93
RNF223E7ERA6 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
RNF223E7ERA6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RNF223E7ERA6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RNF223E7ERA6 AL161722.3-201ENST00000605789 2983 ntBASIC2.99□□□□□ -1.93
RNF223E7ERA6 IPO8P1-201ENST00000455509 3109 ntBASIC2.99□□□□□ -1.93
RNF223E7ERA6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RNF223E7ERA6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.98□□□□□ -1.93
RNF223E7ERA6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
RNF223E7ERA6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
RNF223E7ERA6 RNU4-82P-201ENST00000362443 140 ntBASIC2.98□□□□□ -1.93
RNF223E7ERA6 RNU6-154P-201ENST00000384306 106 ntBASIC2.98□□□□□ -1.93
RNF223E7ERA6 MIR520C-201ENST00000385005 87 ntBASIC2.98□□□□□ -1.93
RNF223E7ERA6 BX510359.4-201ENST00000423750 193 ntBASIC2.98□□□□□ -1.93
RNF223E7ERA6 AC121758.2-201ENST00000553271 193 ntBASIC2.98□□□□□ -1.93
RNF223E7ERA6 MIR486-1-201ENST00000612171 68 ntBASIC2.98□□□□□ -1.93
RNF223E7ERA6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNF223E7ERA6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF223E7ERA6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF223E7ERA6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RNF223E7ERA6 RNU6-461P-201ENST00000364195 107 ntBASIC2.97□□□□□ -1.93
RNF223E7ERA6 MIR520A-201ENST00000384862 85 ntBASIC2.97□□□□□ -1.93
RNF223E7ERA6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.97□□□□□ -1.93
RNF223E7ERA6 RNU2-7P-201ENST00000410794 178 ntBASIC2.97□□□□□ -1.93
RNF223E7ERA6 AC245517.4-201ENST00000448601 281 ntBASIC2.97□□□□□ -1.93
RNF223E7ERA6 snoU13.17-201ENST00000458802 104 ntBASIC2.97□□□□□ -1.93
RNF223E7ERA6 AC099513.1-201ENST00000490423 301 ntBASIC2.97□□□□□ -1.93
RNF223E7ERA6 MIR3935-201ENST00000583472 104 ntBASIC2.97□□□□□ -1.93
RNF223E7ERA6 MIR7112-201ENST00000616126 65 ntBASIC2.97□□□□□ -1.93
RNF223E7ERA6 MIR4251-201ENST00000635819 61 ntBASIC2.97□□□□□ -1.93
RNF223E7ERA6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF223E7ERA6 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
RNF223E7ERA6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
RNF223E7ERA6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.96□□□□□ -1.94
RNF223E7ERA6 RNU6-895P-201ENST00000384125 103 ntBASIC2.96□□□□□ -1.94
RNF223E7ERA6 Y_RNA.443-201ENST00000384135 111 ntBASIC2.96□□□□□ -1.94
RNF223E7ERA6 RNU6-614P-201ENST00000384369 107 ntBASIC2.96□□□□□ -1.94
RNF223E7ERA6 SNORD17-201ENST00000390930 237 ntBASIC2.96□□□□□ -1.94
RNF223E7ERA6 U6.59-201ENST00000615686 107 ntBASIC2.96□□□□□ -1.94
RNF223E7ERA6 MIR6852-201ENST00000621699 66 ntBASIC2.96□□□□□ -1.94
RNF223E7ERA6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF223E7ERA6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF223E7ERA6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.95□□□□□ -1.94
RNF223E7ERA6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF223E7ERA6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.95□□□□□ -1.94
RNF223E7ERA6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
RNF223E7ERA6 MIR424-201ENST00000362227 98 ntBASIC2.95□□□□□ -1.94
RNF223E7ERA6 RNU1-18P-201ENST00000363062 164 ntBASIC2.95□□□□□ -1.94
RNF223E7ERA6 SNORD21-201ENST00000383953 95 ntBASIC2.95□□□□□ -1.94
RNF223E7ERA6 RNU6-291P-201ENST00000384720 107 ntBASIC2.95□□□□□ -1.94
RNF223E7ERA6 AC104332.2-201ENST00000429959 156 ntBASIC2.95□□□□□ -1.94
RNF223E7ERA6 snoU13.2-201ENST00000459201 104 ntBASIC2.95□□□□□ -1.94
RNF223E7ERA6 TRBV12-2-201ENST00000489763 344 ntBASIC2.95□□□□□ -1.94
RNF223E7ERA6 MIR2114-201ENST00000516645 80 ntBASIC2.95□□□□□ -1.94
RNF223E7ERA6 RNA5SP437-201ENST00000517249 129 ntBASIC2.95□□□□□ -1.94
RNF223E7ERA6 AL096861.1-201ENST00000610899 123 ntBASIC2.95□□□□□ -1.94
RNF223E7ERA6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RNF223E7ERA6 Y_RNA.42-201ENST00000362660 108 ntBASIC2.94□□□□□ -1.94
RNF223E7ERA6 RNU6-340P-201ENST00000364005 107 ntBASIC2.94□□□□□ -1.94
RNF223E7ERA6 Y_RNA.500-201ENST00000384466 111 ntBASIC2.94□□□□□ -1.94
RNF223E7ERA6 AC092628.1-201ENST00000436250 252 ntBASIC2.94□□□□□ -1.94
RNF223E7ERA6 RPL23AP94-201ENST00000512518 302 ntBASIC2.94□□□□□ -1.94
RNF223E7ERA6 AP003355.3-201ENST00000623465 114 ntBASIC2.94□□□□□ -1.94
RNF223E7ERA6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.94□□□□□ -1.94
RNF223E7ERA6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
RNF223E7ERA6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RNF223E7ERA6 MIR597-201ENST00000384968 97 ntBASIC2.93□□□□□ -1.94
RNF223E7ERA6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC2.93□□□□□ -1.94
RNF223E7ERA6 snoU13.27-201ENST00000459278 104 ntBASIC2.93□□□□□ -1.94
RNF223E7ERA6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.93□□□□□ -1.94
RNF223E7ERA6 MIR5680-201ENST00000577577 84 ntBASIC2.93□□□□□ -1.94
RNF223E7ERA6 MIR4513-201ENST00000581077 86 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms