Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 SNORA67-201ENST00000384423 137 ntBASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR29B1-201ENST00000385015 81 ntBASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR125B1-201ENST00000385236 88 ntBASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR591-201ENST00000385290 95 ntBASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 RNU6-995P-201ENST00000391244 107 ntBASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 SNORD111-201ENST00000408139 94 ntBASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR548E-201ENST00000408287 88 ntBASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 MIR548L-201ENST00000408303 86 ntBASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 RN7SL346P-201ENST00000491561 294 ntBASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 RNU6-135P-201ENST00000516769 101 ntBASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 AC243829.3-201ENST00000622177 108 ntBASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 AL691477.1-201ENST00000624398 162 ntBASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
KRTAP3-3Q9BYR6 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 MAPK10-320ENST00000641462 6696 ntBASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 Y_RNA.345-201ENST00000365384 92 ntBASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 SNORA70.10-201ENST00000384515 134 ntBASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 RPS26P2-201ENST00000440331 348 ntBASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 RNA5SP497-201ENST00000516081 97 ntBASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 RNU7-154P-201ENST00000516194 62 ntBASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 RNA5SP392-201ENST00000516905 112 ntBASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC2.41□□□□□ -2.02
KRTAP3-3Q9BYR6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
KRTAP3-3Q9BYR6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
KRTAP3-3Q9BYR6 RNU1-14P-201ENST00000362759 152 ntBASIC2.4□□□□□ -2.03
KRTAP3-3Q9BYR6 RNA5SP510-201ENST00000364697 99 ntBASIC2.4□□□□□ -2.03
KRTAP3-3Q9BYR6 MIR582-201ENST00000365731 98 ntBASIC2.4□□□□□ -2.03
KRTAP3-3Q9BYR6 SNORD96B-201ENST00000386148 79 ntBASIC2.4□□□□□ -2.03
KRTAP3-3Q9BYR6 RNU7-56P-201ENST00000458744 62 ntBASIC2.4□□□□□ -2.03
KRTAP3-3Q9BYR6 BX284632.1-201ENST00000478218 541 ntBASIC2.4□□□□□ -2.03
KRTAP3-3Q9BYR6 AC007224.1-201ENST00000564410 144 ntBASIC2.4□□□□□ -2.03
KRTAP3-3Q9BYR6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
KRTAP3-3Q9BYR6 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP3-3Q9BYR6 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP3-3Q9BYR6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP3-3Q9BYR6 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP3-3Q9BYR6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC2.4□□□□□ -2.03
KRTAP3-3Q9BYR6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC2.39□□□□□ -2.03
KRTAP3-3Q9BYR6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP3-3Q9BYR6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP3-3Q9BYR6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP3-3Q9BYR6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
KRTAP3-3Q9BYR6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP3-3Q9BYR6 MIR627-201ENST00000384979 97 ntBASIC2.39□□□□□ -2.03
KRTAP3-3Q9BYR6 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP3-3Q9BYR6 AC015712.3-201ENST00000559380 164 ntBASIC2.39□□□□□ -2.03
KRTAP3-3Q9BYR6 AL022401.1-201ENST00000619498 108 ntBASIC2.39□□□□□ -2.03
KRTAP3-3Q9BYR6 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP3-3Q9BYR6 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP3-3Q9BYR6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP3-3Q9BYR6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.39□□□□□ -2.03
KRTAP3-3Q9BYR6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 RNU1-63P-201ENST00000383902 164 ntBASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 Y_RNA.407-201ENST00000383986 113 ntBASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 MIR516B1-201ENST00000385211 90 ntBASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 MIR652-201ENST00000385278 98 ntBASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 MIR3614-201ENST00000581261 86 ntBASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 MIR4639-201ENST00000584938 69 ntBASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 AL136317.1-201ENST00000612653 226 ntBASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 AL773524.1-201ENST00000614065 229 ntBASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 uc_338.18-201ENST00000615451 175 ntBASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 MIR1910-201ENST00000636955 80 ntBASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 AL021368.2-201ENST00000606125 5352 ntBASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KRTAP3-3Q9BYR6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
KRTAP3-3Q9BYR6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms