Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RNU7-73P-201ENST00000458743 63 ntBASIC3.41□□□□□ -1.86
SCUBE3Q8IX30 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.41□□□□□ -1.86
SCUBE3Q8IX30 MIR5680-201ENST00000577577 84 ntBASIC3.41□□□□□ -1.86
SCUBE3Q8IX30 MIR5004-201ENST00000579078 107 ntBASIC3.41□□□□□ -1.86
SCUBE3Q8IX30 RNU6-90P-201ENST00000606352 106 ntBASIC3.41□□□□□ -1.86
SCUBE3Q8IX30 AL020996.3-201ENST00000606617 222 ntBASIC3.41□□□□□ -1.86
SCUBE3Q8IX30 AL162274.2-201ENST00000614406 332 ntBASIC3.41□□□□□ -1.86
SCUBE3Q8IX30 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SCUBE3Q8IX30 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SCUBE3Q8IX30 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
SCUBE3Q8IX30 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SCUBE3Q8IX30 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.4□□□□□ -1.86
SCUBE3Q8IX30 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SCUBE3Q8IX30 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
SCUBE3Q8IX30 RNA5SP374-201ENST00000362939 125 ntBASIC3.4□□□□□ -1.87
SCUBE3Q8IX30 RNU6-23P-201ENST00000363283 107 ntBASIC3.4□□□□□ -1.87
SCUBE3Q8IX30 SNORA80A-201ENST00000363922 136 ntBASIC3.4□□□□□ -1.87
SCUBE3Q8IX30 MIR206-201ENST00000384872 86 ntBASIC3.4□□□□□ -1.87
SCUBE3Q8IX30 RNU6-220P-201ENST00000390919 107 ntBASIC3.4□□□□□ -1.87
SCUBE3Q8IX30 RNU1-101P-201ENST00000391171 127 ntBASIC3.4□□□□□ -1.87
SCUBE3Q8IX30 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.4□□□□□ -1.87
SCUBE3Q8IX30 HMGN1P18-201ENST00000457642 277 ntBASIC3.4□□□□□ -1.87
SCUBE3Q8IX30 RNU7-12P-201ENST00000516030 62 ntBASIC3.4□□□□□ -1.87
SCUBE3Q8IX30 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.4□□□□□ -1.87
SCUBE3Q8IX30 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.4□□□□□ -1.87
SCUBE3Q8IX30 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SCUBE3Q8IX30 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 MIR34C-201ENST00000384831 77 ntBASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 MIR516B2-201ENST00000385190 85 ntBASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 AL034345.1-201ENST00000407768 123 ntBASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 MIR548G-201ENST00000408442 89 ntBASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 RPL31P63-201ENST00000422565 375 ntBASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 RNU1-98P-201ENST00000458992 160 ntBASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 RNA5SP168-201ENST00000516642 112 ntBASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 MIR2682-201ENST00000580305 110 ntBASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
SCUBE3Q8IX30 RNA5SP432-201ENST00000362480 116 ntBASIC3.38□□□□□ -1.87
SCUBE3Q8IX30 SNORD115-37-201ENST00000363768 82 ntBASIC3.38□□□□□ -1.87
SCUBE3Q8IX30 MIR452-201ENST00000385020 85 ntBASIC3.38□□□□□ -1.87
SCUBE3Q8IX30 MIR136-201ENST00000385207 82 ntBASIC3.38□□□□□ -1.87
SCUBE3Q8IX30 RNU6-913P-201ENST00000390913 95 ntBASIC3.38□□□□□ -1.87
SCUBE3Q8IX30 SNORA48.8-201ENST00000391324 134 ntBASIC3.38□□□□□ -1.87
SCUBE3Q8IX30 RNU6-613P-201ENST00000410412 108 ntBASIC3.38□□□□□ -1.87
SCUBE3Q8IX30 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.38□□□□□ -1.87
SCUBE3Q8IX30 U7.4-201ENST00000614961 63 ntBASIC3.38□□□□□ -1.87
SCUBE3Q8IX30 AC243994.1-201ENST00000618627 109 ntBASIC3.38□□□□□ -1.87
SCUBE3Q8IX30 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SCUBE3Q8IX30 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SCUBE3Q8IX30 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SCUBE3Q8IX30 RNU6-1019P-201ENST00000364424 107 ntBASIC3.37□□□□□ -1.87
SCUBE3Q8IX30 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SCUBE3Q8IX30 RNU6-1307P-201ENST00000391012 103 ntBASIC3.37□□□□□ -1.87
SCUBE3Q8IX30 AC140658.3-201ENST00000567603 271 ntBASIC3.37□□□□□ -1.87
SCUBE3Q8IX30 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SCUBE3Q8IX30 RNA5SP126-201ENST00000365092 109 ntBASIC3.36□□□□□ -1.87
SCUBE3Q8IX30 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.36□□□□□ -1.87
SCUBE3Q8IX30 AC104027.1-201ENST00000521887 300 ntBASIC3.36□□□□□ -1.87
SCUBE3Q8IX30 MIR4672-201ENST00000583126 81 ntBASIC3.36□□□□□ -1.87
SCUBE3Q8IX30 RPL12P50-201ENST00000603116 116 ntBASIC3.36□□□□□ -1.87
SCUBE3Q8IX30 AC006023.1-201ENST00000603944 259 ntBASIC3.36□□□□□ -1.87
SCUBE3Q8IX30 AC073476.4-201ENST00000628409 72 ntBASIC3.36□□□□□ -1.87
SCUBE3Q8IX30 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SCUBE3Q8IX30 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SCUBE3Q8IX30 RNU6-865P-201ENST00000364772 107 ntBASIC3.35□□□□□ -1.87
SCUBE3Q8IX30 Y_RNA.545-201ENST00000384652 105 ntBASIC3.35□□□□□ -1.87
SCUBE3Q8IX30 AC245047.7-201ENST00000440265 293 ntBASIC3.35□□□□□ -1.87
SCUBE3Q8IX30 SPINT5P-201ENST00000448174 155 ntBASIC3.35□□□□□ -1.87
SCUBE3Q8IX30 RNA5SP341-201ENST00000516261 117 ntBASIC3.35□□□□□ -1.87
SCUBE3Q8IX30 RNU7-35P-201ENST00000517174 62 ntBASIC3.35□□□□□ -1.87
SCUBE3Q8IX30 MIR548AR-201ENST00000582191 57 ntBASIC3.35□□□□□ -1.87
SCUBE3Q8IX30 MIR7106-201ENST00000612419 65 ntBASIC3.35□□□□□ -1.87
SCUBE3Q8IX30 MIR6715A-201ENST00000615929 79 ntBASIC3.35□□□□□ -1.87
SCUBE3Q8IX30 AC022513.1-201ENST00000624512 117 ntBASIC3.35□□□□□ -1.87
SCUBE3Q8IX30 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.35□□□□□ -1.87
SCUBE3Q8IX30 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 RNU6-342P-201ENST00000384521 104 ntBASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 RNU6-950P-201ENST00000384651 107 ntBASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 RNU4-47P-201ENST00000410876 114 ntBASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 RN7SL442P-201ENST00000473804 320 ntBASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 AC092185.1-201ENST00000491371 97 ntBASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 SCARNA20.6-201ENST00000517251 106 ntBASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 AL513043.2-201ENST00000573941 143 ntBASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 AC005786.1-201ENST00000588553 154 ntBASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SCUBE3Q8IX30 RNU6-315P-201ENST00000362666 107 ntBASIC3.33□□□□□ -1.88
SCUBE3Q8IX30 HSPE1P9-201ENST00000440046 311 ntBASIC3.33□□□□□ -1.88
SCUBE3Q8IX30 RPS29P12-201ENST00000460178 152 ntBASIC3.33□□□□□ -1.88
SCUBE3Q8IX30 RN7SL863P-201ENST00000462370 296 ntBASIC3.33□□□□□ -1.88
SCUBE3Q8IX30 SNORA64.4-201ENST00000516632 81 ntBASIC3.33□□□□□ -1.88
SCUBE3Q8IX30 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms