Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CD44P16070 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CD44P16070 AC027290.2-201ENST00000623210 18662 ntBASIC4□□□□□ -1.77
CD44P16070 SNORA57.3-201ENST00000411095 141 ntBASIC4□□□□□ -1.77
CD44P16070 AC006989.1-201ENST00000427212 131 ntBASIC4□□□□□ -1.77
CD44P16070 AC026402.1-201ENST00000513642 170 ntBASIC4□□□□□ -1.77
CD44P16070 SCARNA21.1-201ENST00000515996 128 ntBASIC4□□□□□ -1.77
CD44P16070 RNU7-43P-201ENST00000516554 64 ntBASIC4□□□□□ -1.77
CD44P16070 AC007224.1-201ENST00000564410 144 ntBASIC4□□□□□ -1.77
CD44P16070 MIR3938-201ENST00000582157 103 ntBASIC4□□□□□ -1.77
CD44P16070 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4□□□□□ -1.77
CD44P16070 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CD44P16070 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CD44P16070 MAPK10-373ENST00000641983 6772 ntBASIC3.99□□□□□ -1.77
CD44P16070 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD44P16070 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD44P16070 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD44P16070 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CD44P16070 RNU6-668P-201ENST00000364180 107 ntBASIC3.99□□□□□ -1.77
CD44P16070 AC004975.1-201ENST00000428733 208 ntBASIC3.99□□□□□ -1.77
CD44P16070 MTND4LP1-201ENST00000446263 157 ntBASIC3.99□□□□□ -1.77
CD44P16070 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC3.99□□□□□ -1.77
CD44P16070 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.99□□□□□ -1.77
CD44P16070 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.99□□□□□ -1.77
CD44P16070 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CD44P16070 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.99□□□□□ -1.77
CD44P16070 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CD44P16070 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CD44P16070 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CD44P16070 RNU6-23P-201ENST00000363283 107 ntBASIC3.98□□□□□ -1.77
CD44P16070 RNU6-654P-201ENST00000364373 107 ntBASIC3.98□□□□□ -1.77
CD44P16070 SNORA67.4-201ENST00000384688 142 ntBASIC3.98□□□□□ -1.77
CD44P16070 AL023284.1-201ENST00000403956 276 ntBASIC3.98□□□□□ -1.77
CD44P16070 RNU6-752P-201ENST00000516376 102 ntBASIC3.98□□□□□ -1.77
CD44P16070 RNU6-579P-201ENST00000516879 102 ntBASIC3.98□□□□□ -1.77
CD44P16070 RNU11-2P-201ENST00000516898 142 ntBASIC3.98□□□□□ -1.77
CD44P16070 MIR7515-201ENST00000637837 67 ntBASIC3.98□□□□□ -1.77
CD44P16070 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CD44P16070 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.98□□□□□ -1.77
CD44P16070 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CD44P16070 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD44P16070 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.97□□□□□ -1.77
CD44P16070 SNORA25B-201ENST00000365507 128 ntBASIC3.97□□□□□ -1.77
CD44P16070 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CD44P16070 AL138878.1-201ENST00000405131 347 ntBASIC3.97□□□□□ -1.77
CD44P16070 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.97□□□□□ -1.77
CD44P16070 SNORA70.18-201ENST00000516696 98 ntBASIC3.97□□□□□ -1.77
CD44P16070 NDUFB9P3-201ENST00000521269 501 ntBASIC3.97□□□□□ -1.77
CD44P16070 AC026333.2-201ENST00000542164 106 ntBASIC3.97□□□□□ -1.77
CD44P16070 AC110741.2-201ENST00000605278 268 ntBASIC3.97□□□□□ -1.77
CD44P16070 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD44P16070 RNU6-664P-201ENST00000362381 107 ntBASIC3.96□□□□□ -1.78
CD44P16070 RNA5SP51-201ENST00000364750 119 ntBASIC3.96□□□□□ -1.78
CD44P16070 RNU6-628P-201ENST00000410675 107 ntBASIC3.96□□□□□ -1.78
CD44P16070 AL606490.4-201ENST00000423117 127 ntBASIC3.96□□□□□ -1.78
CD44P16070 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.96□□□□□ -1.78
CD44P16070 PARP1P2-201ENST00000556806 195 ntBASIC3.96□□□□□ -1.78
CD44P16070 MIR4286-201ENST00000580651 93 ntBASIC3.96□□□□□ -1.78
CD44P16070 MIR4696-201ENST00000581431 70 ntBASIC3.96□□□□□ -1.78
CD44P16070 TRDV1-202ENST00000621643 102 ntBASIC3.96□□□□□ -1.78
CD44P16070 IST1-227ENST00000626438 126 ntTSL 5 BASIC3.96□□□□□ -1.78
CD44P16070 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD44P16070 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CD44P16070 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CD44P16070 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CD44P16070 snoU13.2-201ENST00000459201 104 ntBASIC3.95□□□□□ -1.78
CD44P16070 MIR3920-201ENST00000581751 86 ntBASIC3.95□□□□□ -1.78
CD44P16070 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.95□□□□□ -1.78
CD44P16070 RNVU1-4-201ENST00000612985 164 ntBASIC3.95□□□□□ -1.78
CD44P16070 AC106800.4-201ENST00000614905 153 ntBASIC3.95□□□□□ -1.78
CD44P16070 U7.8-201ENST00000619968 63 ntBASIC3.95□□□□□ -1.78
CD44P16070 AC110079.1-202ENST00000635213 138 ntBASIC3.95□□□□□ -1.78
CD44P16070 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD44P16070 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD44P16070 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
CD44P16070 MIR30E-201ENST00000362104 92 ntBASIC3.94□□□□□ -1.78
CD44P16070 RNU6-753P-201ENST00000363926 107 ntBASIC3.94□□□□□ -1.78
CD44P16070 SNORD101-201ENST00000384027 73 ntBASIC3.94□□□□□ -1.78
CD44P16070 MIR184-201ENST00000384962 84 ntBASIC3.94□□□□□ -1.78
CD44P16070 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CD44P16070 RNU6-274P-201ENST00000459566 107 ntBASIC3.94□□□□□ -1.78
CD44P16070 RNU6-122P-201ENST00000516818 107 ntBASIC3.94□□□□□ -1.78
CD44P16070 MIR2116-201ENST00000517221 80 ntBASIC3.94□□□□□ -1.78
CD44P16070 MIR5685-201ENST00000579080 79 ntBASIC3.94□□□□□ -1.78
CD44P16070 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.94□□□□□ -1.78
CD44P16070 MIR6810-201ENST00000622701 70 ntBASIC3.94□□□□□ -1.78
CD44P16070 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD44P16070 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD44P16070 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.93□□□□□ -1.78
CD44P16070 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.93□□□□□ -1.78
CD44P16070 RNU1-109P-201ENST00000383960 147 ntBASIC3.93□□□□□ -1.78
CD44P16070 RNA5SP445-201ENST00000515889 115 ntBASIC3.93□□□□□ -1.78
CD44P16070 MIR2276-201ENST00000516886 89 ntBASIC3.93□□□□□ -1.78
CD44P16070 MIR4425-201ENST00000580572 84 ntBASIC3.93□□□□□ -1.78
CD44P16070 SNORA4-201ENST00000584302 138 ntBASIC3.93□□□□□ -1.78
CD44P16070 DLEU2_4.2-201ENST00000616613 58 ntBASIC3.93□□□□□ -1.78
CD44P16070 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.93□□□□□ -1.78
CD44P16070 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CD44P16070 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CD44P16070 SNORD9-201ENST00000362566 104 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms