Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC019176.2-201ENST00000611579 315 ntBASIC3.46□□□□□ -1.86
ACTN4O43707 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ACTN4O43707 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ACTN4O43707 AC007336.1-201ENST00000576365 3828 ntBASIC3.45□□□□□ -1.86
ACTN4O43707 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.45□□□□□ -1.86
ACTN4O43707 RNU6-1229P-201ENST00000364295 107 ntBASIC3.45□□□□□ -1.86
ACTN4O43707 MIR34C-201ENST00000384831 77 ntBASIC3.45□□□□□ -1.86
ACTN4O43707 RNU6-220P-201ENST00000390919 107 ntBASIC3.45□□□□□ -1.86
ACTN4O43707 AC003685.2-201ENST00000422795 395 ntBASIC3.45□□□□□ -1.86
ACTN4O43707 RNU7-12P-201ENST00000516030 62 ntBASIC3.45□□□□□ -1.86
ACTN4O43707 RNU6-826P-201ENST00000516827 104 ntBASIC3.45□□□□□ -1.86
ACTN4O43707 MIR7112-201ENST00000616126 65 ntBASIC3.45□□□□□ -1.86
ACTN4O43707 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
ACTN4O43707 SNORD115-37-201ENST00000363768 82 ntBASIC3.44□□□□□ -1.86
ACTN4O43707 AL034345.1-201ENST00000407768 123 ntBASIC3.44□□□□□ -1.86
ACTN4O43707 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.44□□□□□ -1.86
ACTN4O43707 SNORA31.10-201ENST00000516482 106 ntBASIC3.44□□□□□ -1.86
ACTN4O43707 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.44□□□□□ -1.86
ACTN4O43707 RNU6-90P-201ENST00000606352 106 ntBASIC3.44□□□□□ -1.86
ACTN4O43707 AC012314.7-201ENST00000619693 93 ntBASIC3.44□□□□□ -1.86
ACTN4O43707 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.43□□□□□ -1.86
ACTN4O43707 AL035425.3-201ENST00000564206 4996 ntBASIC3.43□□□□□ -1.86
ACTN4O43707 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ACTN4O43707 RNU6-865P-201ENST00000364772 107 ntBASIC3.43□□□□□ -1.86
ACTN4O43707 SNORA24-201ENST00000384096 131 ntBASIC3.43□□□□□ -1.86
ACTN4O43707 SNORA54-201ENST00000384281 123 ntBASIC3.43□□□□□ -1.86
ACTN4O43707 MIR452-201ENST00000385020 85 ntBASIC3.43□□□□□ -1.86
ACTN4O43707 MIR136-201ENST00000385207 82 ntBASIC3.43□□□□□ -1.86
ACTN4O43707 RNU6-913P-201ENST00000390913 95 ntBASIC3.43□□□□□ -1.86
ACTN4O43707 RNU6-1307P-201ENST00000391012 103 ntBASIC3.43□□□□□ -1.86
ACTN4O43707 MIR548G-201ENST00000408442 89 ntBASIC3.43□□□□□ -1.86
ACTN4O43707 RNU7-73P-201ENST00000458743 63 ntBASIC3.43□□□□□ -1.86
ACTN4O43707 RNU1-98P-201ENST00000458992 160 ntBASIC3.43□□□□□ -1.86
ACTN4O43707 RNA5SP168-201ENST00000516642 112 ntBASIC3.43□□□□□ -1.86
ACTN4O43707 MIR622-201ENST00000638396 96 ntBASIC3.43□□□□□ -1.86
ACTN4O43707 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ACTN4O43707 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.43□□□□□ -1.86
ACTN4O43707 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ACTN4O43707 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
ACTN4O43707 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
ACTN4O43707 SNORD15B-201ENST00000384714 146 ntBASIC3.42□□□□□ -1.86
ACTN4O43707 RNU4-47P-201ENST00000410876 114 ntBASIC3.42□□□□□ -1.86
ACTN4O43707 SPINT5P-201ENST00000448174 155 ntBASIC3.42□□□□□ -1.86
ACTN4O43707 PRSS3P4-201ENST00000453323 162 ntBASIC3.42□□□□□ -1.86
ACTN4O43707 RNA5SP385-201ENST00000515947 110 ntBASIC3.42□□□□□ -1.86
ACTN4O43707 MIR4506-201ENST00000584693 77 ntBASIC3.42□□□□□ -1.86
ACTN4O43707 AC243994.1-201ENST00000618627 109 ntBASIC3.42□□□□□ -1.86
ACTN4O43707 AC007318.2-201ENST00000620999 243 ntBASIC3.42□□□□□ -1.86
ACTN4O43707 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ACTN4O43707 AC245047.7-201ENST00000440265 293 ntBASIC3.41□□□□□ -1.86
ACTN4O43707 MIR5680-201ENST00000577577 84 ntBASIC3.41□□□□□ -1.86
ACTN4O43707 U7.4-201ENST00000614961 63 ntBASIC3.41□□□□□ -1.86
ACTN4O43707 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.41□□□□□ -1.86
ACTN4O43707 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.41□□□□□ -1.86
ACTN4O43707 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ACTN4O43707 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ACTN4O43707 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
ACTN4O43707 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.4□□□□□ -1.86
ACTN4O43707 RNU6-1019P-201ENST00000364424 107 ntBASIC3.4□□□□□ -1.87
ACTN4O43707 RNU6-342P-201ENST00000384521 104 ntBASIC3.4□□□□□ -1.87
ACTN4O43707 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.4□□□□□ -1.87
ACTN4O43707 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.4□□□□□ -1.87
ACTN4O43707 AC006483.1-201ENST00000487308 313 ntBASIC3.4□□□□□ -1.87
ACTN4O43707 RN7SL633P-201ENST00000488974 297 ntBASIC3.4□□□□□ -1.87
ACTN4O43707 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.4□□□□□ -1.87
ACTN4O43707 AC069114.2-201ENST00000604699 304 ntBASIC3.4□□□□□ -1.87
ACTN4O43707 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ACTN4O43707 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
ACTN4O43707 SNORD46.1-201ENST00000364139 104 ntBASIC3.39□□□□□ -1.87
ACTN4O43707 Y_RNA.448-201ENST00000384185 108 ntBASIC3.39□□□□□ -1.87
ACTN4O43707 Y_RNA.545-201ENST00000384652 105 ntBASIC3.39□□□□□ -1.87
ACTN4O43707 RNVU1-14-201ENST00000384770 164 ntBASIC3.39□□□□□ -1.87
ACTN4O43707 RNA5SP274-201ENST00000410484 108 ntBASIC3.39□□□□□ -1.87
ACTN4O43707 RNA5SP120-201ENST00000410900 112 ntBASIC3.39□□□□□ -1.87
ACTN4O43707 HSPE1P9-201ENST00000440046 311 ntBASIC3.39□□□□□ -1.87
ACTN4O43707 RPS29P12-201ENST00000460178 152 ntBASIC3.39□□□□□ -1.87
ACTN4O43707 AL513043.2-201ENST00000573941 143 ntBASIC3.39□□□□□ -1.87
ACTN4O43707 AC022513.1-201ENST00000624512 117 ntBASIC3.39□□□□□ -1.87
ACTN4O43707 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ACTN4O43707 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.38□□□□□ -1.87
ACTN4O43707 RNA5SP72-201ENST00000364442 117 ntBASIC3.38□□□□□ -1.87
ACTN4O43707 NDUFB4P4-201ENST00000404822 243 ntBASIC3.38□□□□□ -1.87
ACTN4O43707 RNU6-613P-201ENST00000410412 108 ntBASIC3.38□□□□□ -1.87
ACTN4O43707 AP004217.1-201ENST00000480579 346 ntBASIC3.38□□□□□ -1.87
ACTN4O43707 RNU7-35P-201ENST00000517174 62 ntBASIC3.38□□□□□ -1.87
ACTN4O43707 AC140658.3-201ENST00000567603 271 ntBASIC3.38□□□□□ -1.87
ACTN4O43707 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ACTN4O43707 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
ACTN4O43707 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.37□□□□□ -1.87
ACTN4O43707 SNORA63.1-201ENST00000362493 131 ntBASIC3.37□□□□□ -1.87
ACTN4O43707 SNORD115-3-201ENST00000363100 82 ntBASIC3.37□□□□□ -1.87
ACTN4O43707 RNU6-950P-201ENST00000384651 107 ntBASIC3.37□□□□□ -1.87
ACTN4O43707 HMGN1P33-201ENST00000432945 451 ntBASIC3.37□□□□□ -1.87
ACTN4O43707 RN7SL601P-201ENST00000471221 293 ntBASIC3.37□□□□□ -1.87
ACTN4O43707 MIR5004-201ENST00000579078 107 ntBASIC3.37□□□□□ -1.87
ACTN4O43707 MIR548AR-201ENST00000582191 57 ntBASIC3.37□□□□□ -1.87
ACTN4O43707 AC005786.1-201ENST00000588553 154 ntBASIC3.37□□□□□ -1.87
ACTN4O43707 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
ACTN4O43707 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
ACTN4O43707 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 198.9 ms