Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 RNU6-90P-201ENST00000606352 106 ntBASIC3.8□□□□□ -1.8
PTPREP23469 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPREP23469 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPREP23469 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPREP23469 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
PTPREP23469 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPREP23469 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPREP23469 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPREP23469 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPREP23469 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPREP23469 AC245060.5-201ENST00000610778 3293 ntBASIC3.79□□□□□ -1.8
PTPREP23469 RNU6-1094P-201ENST00000362416 104 ntBASIC3.79□□□□□ -1.8
PTPREP23469 SNORA1.2-201ENST00000365189 134 ntBASIC3.79□□□□□ -1.8
PTPREP23469 HMGN1P18-201ENST00000457642 277 ntBASIC3.79□□□□□ -1.8
PTPREP23469 RNU7-153P-201ENST00000516455 62 ntBASIC3.79□□□□□ -1.8
PTPREP23469 RNU6-539P-201ENST00000516665 103 ntBASIC3.79□□□□□ -1.8
PTPREP23469 AC073476.4-201ENST00000628409 72 ntBASIC3.79□□□□□ -1.8
PTPREP23469 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPREP23469 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PTPREP23469 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPREP23469 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.78□□□□□ -1.8
PTPREP23469 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTPREP23469 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTPREP23469 RNU1-70P-201ENST00000362618 164 ntBASIC3.78□□□□□ -1.8
PTPREP23469 Y_RNA.370-201ENST00000365589 108 ntBASIC3.78□□□□□ -1.8
PTPREP23469 SPINT5P-201ENST00000448174 155 ntBASIC3.78□□□□□ -1.8
PTPREP23469 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.78□□□□□ -1.8
PTPREP23469 SNORA70.14-201ENST00000516205 110 ntBASIC3.78□□□□□ -1.8
PTPREP23469 SNORD3E-202ENST00000627253 216 ntBASIC3.78□□□□□ -1.8
PTPREP23469 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTPREP23469 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTPREP23469 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTPREP23469 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTPREP23469 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.78□□□□□ -1.81
PTPREP23469 Y_RNA.99-201ENST00000363138 105 ntBASIC3.77□□□□□ -1.81
PTPREP23469 RPS29P29-201ENST00000456396 171 ntBASIC3.77□□□□□ -1.81
PTPREP23469 SNORA25.13-201ENST00000516395 103 ntBASIC3.77□□□□□ -1.81
PTPREP23469 SCARNA20.6-201ENST00000517251 106 ntBASIC3.77□□□□□ -1.81
PTPREP23469 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPREP23469 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.77□□□□□ -1.81
PTPREP23469 AL035425.3-201ENST00000564206 4996 ntBASIC3.76□□□□□ -1.81
PTPREP23469 SNORA44-201ENST00000384584 132 ntBASIC3.76□□□□□ -1.81
PTPREP23469 MIR181B2-201ENST00000385004 89 ntBASIC3.76□□□□□ -1.81
PTPREP23469 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.76□□□□□ -1.81
PTPREP23469 AL355297.2-201ENST00000604792 129 ntBASIC3.76□□□□□ -1.81
PTPREP23469 AL020996.3-201ENST00000606617 222 ntBASIC3.76□□□□□ -1.81
PTPREP23469 uc_338.1-201ENST00000612113 180 ntBASIC3.76□□□□□ -1.81
PTPREP23469 MIR8054-201ENST00000620877 86 ntBASIC3.76□□□□□ -1.81
PTPREP23469 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PTPREP23469 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PTPREP23469 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTPREP23469 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTPREP23469 RNU6-865P-201ENST00000364772 107 ntBASIC3.75□□□□□ -1.81
PTPREP23469 Y_RNA.448-201ENST00000384185 108 ntBASIC3.75□□□□□ -1.81
PTPREP23469 RNU6-342P-201ENST00000384521 104 ntBASIC3.75□□□□□ -1.81
PTPREP23469 RNU6-160P-201ENST00000384591 107 ntBASIC3.75□□□□□ -1.81
PTPREP23469 MIR561-201ENST00000385216 97 ntBASIC3.75□□□□□ -1.81
PTPREP23469 RNU6-913P-201ENST00000390913 95 ntBASIC3.75□□□□□ -1.81
PTPREP23469 RNA5SP229-201ENST00000410809 99 ntBASIC3.75□□□□□ -1.81
PTPREP23469 AL450471.1-201ENST00000447509 127 ntBASIC3.75□□□□□ -1.81
PTPREP23469 AC125388.1-201ENST00000459631 156 ntBASIC3.75□□□□□ -1.81
PTPREP23469 RN7SL863P-201ENST00000462370 296 ntBASIC3.75□□□□□ -1.81
PTPREP23469 AC018868.1-201ENST00000491307 315 ntBASIC3.75□□□□□ -1.81
PTPREP23469 AC007336.1-201ENST00000576365 3828 ntBASIC3.75□□□□□ -1.81
PTPREP23469 AL033523.1-201ENST00000605153 153 ntBASIC3.75□□□□□ -1.81
PTPREP23469 SNORA28-201ENST00000606769 126 ntBASIC3.75□□□□□ -1.81
PTPREP23469 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PTPREP23469 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.74□□□□□ -1.81
PTPREP23469 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTPREP23469 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PTPREP23469 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
PTPREP23469 Y_RNA.173-201ENST00000363776 113 ntBASIC3.74□□□□□ -1.81
PTPREP23469 RNU6-1072P-201ENST00000384703 107 ntBASIC3.74□□□□□ -1.81
PTPREP23469 RNU6-443P-201ENST00000384780 107 ntBASIC3.74□□□□□ -1.81
PTPREP23469 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.74□□□□□ -1.81
PTPREP23469 RNU1-143P-201ENST00000516296 146 ntBASIC3.74□□□□□ -1.81
PTPREP23469 MIR4644-201ENST00000579929 84 ntBASIC3.74□□□□□ -1.81
PTPREP23469 U1.23-201ENST00000610293 146 ntBASIC3.74□□□□□ -1.81
PTPREP23469 RNU1-68P-201ENST00000615382 146 ntBASIC3.74□□□□□ -1.81
PTPREP23469 U1.39-201ENST00000621562 146 ntBASIC3.74□□□□□ -1.81
PTPREP23469 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PTPREP23469 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PTPREP23469 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PTPREP23469 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPREP23469 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPREP23469 SNORA24-201ENST00000384096 131 ntBASIC3.73□□□□□ -1.81
PTPREP23469 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PTPREP23469 RNU6-519P-201ENST00000410590 108 ntBASIC3.73□□□□□ -1.81
PTPREP23469 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.73□□□□□ -1.81
PTPREP23469 SNORA64.4-201ENST00000516632 81 ntBASIC3.73□□□□□ -1.81
PTPREP23469 MIR4474-201ENST00000579189 78 ntBASIC3.73□□□□□ -1.81
PTPREP23469 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PTPREP23469 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPREP23469 SNORD56.3-201ENST00000363507 71 ntBASIC3.72□□□□□ -1.81
PTPREP23469 Y_RNA.340-201ENST00000365330 92 ntBASIC3.72□□□□□ -1.81
PTPREP23469 MIR516B2-201ENST00000385190 85 ntBASIC3.72□□□□□ -1.81
PTPREP23469 MIR1236-201ENST00000408340 102 ntBASIC3.72□□□□□ -1.81
PTPREP23469 CST9LP2-201ENST00000437612 320 ntBASIC3.72□□□□□ -1.81
PTPREP23469 RNU7-35P-201ENST00000517174 62 ntBASIC3.72□□□□□ -1.81
PTPREP23469 MIR3134-201ENST00000579433 74 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms