Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MIR30E-201ENST00000362104 92 ntBASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 SNORA22.1-201ENST00000362701 134 ntBASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 RN7SKP111-201ENST00000410349 271 ntBASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 AL606517.2-201ENST00000442855 241 ntBASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 RNU7-181P-201ENST00000517234 74 ntBASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 MIR4474-201ENST00000579189 78 ntBASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.56□□□□□ -1.84
SCUBE3Q8IX30 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCUBE3Q8IX30 RNU6-160P-201ENST00000384591 107 ntBASIC3.55□□□□□ -1.84
SCUBE3Q8IX30 RN7SL429P-201ENST00000479090 223 ntBASIC3.55□□□□□ -1.84
SCUBE3Q8IX30 RN7SL489P-201ENST00000486185 223 ntBASIC3.55□□□□□ -1.84
SCUBE3Q8IX30 RN7SL327P-201ENST00000488659 223 ntBASIC3.55□□□□□ -1.84
SCUBE3Q8IX30 AC018868.1-201ENST00000491307 315 ntBASIC3.55□□□□□ -1.84
SCUBE3Q8IX30 AC023141.11-201ENST00000508864 202 ntBASIC3.55□□□□□ -1.84
SCUBE3Q8IX30 AC007536.1-201ENST00000533382 349 ntBASIC3.55□□□□□ -1.84
SCUBE3Q8IX30 AC103810.6-201ENST00000606708 136 ntBASIC3.55□□□□□ -1.84
SCUBE3Q8IX30 RN7SL853P-201ENST00000617250 223 ntBASIC3.55□□□□□ -1.84
SCUBE3Q8IX30 AL356274.2-201ENST00000624379 3752 ntBASIC3.55□□□□□ -1.84
SCUBE3Q8IX30 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCUBE3Q8IX30 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.55□□□□□ -1.84
SCUBE3Q8IX30 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCUBE3Q8IX30 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 SNORA68.1-201ENST00000364537 132 ntBASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 MIR889-201ENST00000401280 79 ntBASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 RNA5SP261-201ENST00000410536 106 ntBASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 Y_RNA.609-201ENST00000410669 89 ntBASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 RN7SKP192-201ENST00000411291 327 ntBASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 SEM1P1-201ENST00000506694 209 ntBASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 MIR2276-201ENST00000516886 89 ntBASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 MIR4325-201ENST00000583049 90 ntBASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.54□□□□□ -1.84
SCUBE3Q8IX30 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SCUBE3Q8IX30 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SCUBE3Q8IX30 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SCUBE3Q8IX30 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.53□□□□□ -1.84
SCUBE3Q8IX30 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SCUBE3Q8IX30 MIRLET7C-201ENST00000362160 84 ntBASIC3.53□□□□□ -1.84
SCUBE3Q8IX30 RPS12P2-201ENST00000439728 269 ntBASIC3.53□□□□□ -1.84
SCUBE3Q8IX30 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.53□□□□□ -1.84
SCUBE3Q8IX30 STAG3L5P-204ENST00000443759 179 ntBASIC3.53□□□□□ -1.84
SCUBE3Q8IX30 MIR4425-201ENST00000580572 84 ntBASIC3.53□□□□□ -1.84
SCUBE3Q8IX30 SNORA28-201ENST00000606769 126 ntBASIC3.53□□□□□ -1.84
SCUBE3Q8IX30 MIR6841-201ENST00000637129 72 ntBASIC3.53□□□□□ -1.84
SCUBE3Q8IX30 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.53□□□□□ -1.84
SCUBE3Q8IX30 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
SCUBE3Q8IX30 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 Y_RNA.247-201ENST00000364500 92 ntBASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 RNU6-1163P-201ENST00000364516 107 ntBASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 SNORA1.2-201ENST00000365189 134 ntBASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 RNU6-1072P-201ENST00000384703 107 ntBASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 RNU6-443P-201ENST00000384780 107 ntBASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 RNA5SP109-201ENST00000391010 116 ntBASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 RNU7-34P-201ENST00000459394 64 ntBASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 UBL5P1-201ENST00000507979 193 ntBASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 SNORD59.2-201ENST00000516873 68 ntBASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 RNVU1-4-201ENST00000612985 164 ntBASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 MIR8054-201ENST00000620877 86 ntBASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SCUBE3Q8IX30 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SCUBE3Q8IX30 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCUBE3Q8IX30 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCUBE3Q8IX30 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCUBE3Q8IX30 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SCUBE3Q8IX30 SNORA70.7-201ENST00000384159 133 ntBASIC3.51□□□□□ -1.85
SCUBE3Q8IX30 RNU6-958P-201ENST00000516995 106 ntBASIC3.51□□□□□ -1.85
SCUBE3Q8IX30 NDUFB9P3-201ENST00000521269 501 ntBASIC3.51□□□□□ -1.85
SCUBE3Q8IX30 EIF4BP1-201ENST00000554881 351 ntBASIC3.51□□□□□ -1.85
SCUBE3Q8IX30 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.51□□□□□ -1.85
SCUBE3Q8IX30 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCUBE3Q8IX30 MAPK10-322ENST00000641485 4530 ntBASIC3.51□□□□□ -1.85
SCUBE3Q8IX30 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.5□□□□□ -1.85
SCUBE3Q8IX30 Y_RNA.140-201ENST00000363474 103 ntBASIC3.5□□□□□ -1.85
SCUBE3Q8IX30 SNORD38.1-201ENST00000363863 68 ntBASIC3.5□□□□□ -1.85
SCUBE3Q8IX30 SNORA25B-201ENST00000365507 128 ntBASIC3.5□□□□□ -1.85
SCUBE3Q8IX30 SNORA26.6-201ENST00000391256 115 ntBASIC3.5□□□□□ -1.85
SCUBE3Q8IX30 RNU7-53P-201ENST00000516705 60 ntBASIC3.5□□□□□ -1.85
SCUBE3Q8IX30 DNAJC19P9-201ENST00000555084 351 ntBASIC3.5□□□□□ -1.85
SCUBE3Q8IX30 MIR4276-201ENST00000584832 70 ntBASIC3.5□□□□□ -1.85
SCUBE3Q8IX30 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.5□□□□□ -1.85
SCUBE3Q8IX30 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SCUBE3Q8IX30 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms