Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC4.17□□□□□ -1.74
CD44P16070 SNORA59A-201ENST00000459326 152 ntBASIC4.17□□□□□ -1.74
CD44P16070 RNU6-667P-201ENST00000517186 102 ntBASIC4.17□□□□□ -1.74
CD44P16070 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC4.17□□□□□ -1.74
CD44P16070 AL662814.1-201ENST00000617364 121 ntBASIC4.17□□□□□ -1.74
CD44P16070 AC244205.2-202ENST00000635781 342 ntBASIC4.17□□□□□ -1.74
CD44P16070 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD44P16070 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD44P16070 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CD44P16070 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CD44P16070 SNORA25.5-201ENST00000363782 126 ntBASIC4.16□□□□□ -1.74
CD44P16070 RNU6-1328P-201ENST00000410938 106 ntBASIC4.16□□□□□ -1.74
CD44P16070 AL117339.2-201ENST00000430475 180 ntBASIC4.16□□□□□ -1.74
CD44P16070 HSPE1P9-201ENST00000440046 311 ntBASIC4.16□□□□□ -1.74
CD44P16070 AC008011.1-201ENST00000545989 227 ntBASIC4.16□□□□□ -1.74
CD44P16070 U6.81-201ENST00000612550 106 ntBASIC4.16□□□□□ -1.74
CD44P16070 SCARNA15.3-201ENST00000626315 122 ntBASIC4.16□□□□□ -1.74
CD44P16070 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.16□□□□□ -1.74
CD44P16070 U6.109-201ENST00000636749 87 ntBASIC4.16□□□□□ -1.74
CD44P16070 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CD44P16070 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CD44P16070 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CD44P16070 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
CD44P16070 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC4.15□□□□□ -1.74
CD44P16070 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.15□□□□□ -1.74
CD44P16070 RNA5SP97-201ENST00000365006 84 ntBASIC4.15□□□□□ -1.75
CD44P16070 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CD44P16070 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC4.15□□□□□ -1.75
CD44P16070 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CD44P16070 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.14□□□□□ -1.75
CD44P16070 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CD44P16070 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CD44P16070 SPRR2C-201ENST00000290702 219 ntBASIC4.14□□□□□ -1.75
CD44P16070 RNA5SP192-201ENST00000364404 120 ntBASIC4.14□□□□□ -1.75
CD44P16070 RNA5SP283-201ENST00000365604 119 ntBASIC4.14□□□□□ -1.75
CD44P16070 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CD44P16070 HMGN2P39-201ENST00000398005 273 ntBASIC4.14□□□□□ -1.75
CD44P16070 RNU2-58P-201ENST00000516403 183 ntBASIC4.14□□□□□ -1.75
CD44P16070 MIR7157-201ENST00000635801 60 ntBASIC4.14□□□□□ -1.75
CD44P16070 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CD44P16070 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CD44P16070 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CD44P16070 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC4.14□□□□□ -1.75
CD44P16070 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CD44P16070 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CD44P16070 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CD44P16070 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CD44P16070 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CD44P16070 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.13□□□□□ -1.75
CD44P16070 Y_RNA.119-201ENST00000363301 96 ntBASIC4.13□□□□□ -1.75
CD44P16070 MIR141-201ENST00000384975 95 ntBASIC4.13□□□□□ -1.75
CD44P16070 AL133547.1-201ENST00000448546 220 ntBASIC4.13□□□□□ -1.75
CD44P16070 MIR3199-1-201ENST00000582434 88 ntBASIC4.13□□□□□ -1.75
CD44P16070 MIR378J-201ENST00000611988 109 ntBASIC4.13□□□□□ -1.75
CD44P16070 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CD44P16070 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.13□□□□□ -1.75
CD44P16070 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CD44P16070 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CD44P16070 RNA5SP424-201ENST00000390988 115 ntBASIC4.12□□□□□ -1.75
CD44P16070 ATP6V0E1P3-201ENST00000420036 246 ntBASIC4.12□□□□□ -1.75
CD44P16070 AL031183.1-201ENST00000457667 207 ntBASIC4.12□□□□□ -1.75
CD44P16070 RN7SL323P-201ENST00000494712 295 ntBASIC4.12□□□□□ -1.75
CD44P16070 AC097510.1-201ENST00000510945 133 ntBASIC4.12□□□□□ -1.75
CD44P16070 RNU2-19P-201ENST00000517288 84 ntBASIC4.12□□□□□ -1.75
CD44P16070 AC121758.2-201ENST00000553271 193 ntBASIC4.12□□□□□ -1.75
CD44P16070 MIR6748-201ENST00000610433 71 ntBASIC4.12□□□□□ -1.75
CD44P16070 U4.3-201ENST00000621047 82 ntBASIC4.12□□□□□ -1.75
CD44P16070 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC4.12□□□□□ -1.75
CD44P16070 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CD44P16070 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC4.11□□□□□ -1.75
CD44P16070 RNU6-1072P-201ENST00000384703 107 ntBASIC4.11□□□□□ -1.75
CD44P16070 RNU6-443P-201ENST00000384780 107 ntBASIC4.11□□□□□ -1.75
CD44P16070 MIR526A1-201ENST00000384897 85 ntBASIC4.11□□□□□ -1.75
CD44P16070 RPS29P31-201ENST00000446147 164 ntBASIC4.11□□□□□ -1.75
CD44P16070 RNU7-106P-201ENST00000459514 67 ntBASIC4.11□□□□□ -1.75
CD44P16070 RNU6-542P-201ENST00000516405 103 ntBASIC4.11□□□□□ -1.75
CD44P16070 MIR4738-201ENST00000579134 87 ntBASIC4.11□□□□□ -1.75
CD44P16070 MIR3140-201ENST00000583685 90 ntBASIC4.11□□□□□ -1.75
CD44P16070 AL606490.9-201ENST00000603331 271 ntBASIC4.11□□□□□ -1.75
CD44P16070 AL096861.1-201ENST00000610899 123 ntBASIC4.11□□□□□ -1.75
CD44P16070 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CD44P16070 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.11□□□□□ -1.75
CD44P16070 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CD44P16070 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CD44P16070 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CD44P16070 SNORA11.4-201ENST00000408823 129 ntBASIC4.1□□□□□ -1.75
CD44P16070 AC006539.3-201ENST00000454258 129 ntBASIC4.1□□□□□ -1.75
CD44P16070 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD44P16070 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CD44P16070 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CD44P16070 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CD44P16070 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.09□□□□□ -1.75
CD44P16070 GABRG2-229ENST00000641017 3628 ntBASIC4.09□□□□□ -1.75
CD44P16070 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CD44P16070 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CD44P16070 RNU6-824P-201ENST00000363724 104 ntBASIC4.09□□□□□ -1.75
CD44P16070 RNA5SP42-201ENST00000364278 115 ntBASIC4.09□□□□□ -1.75
CD44P16070 SNORD38B-201ENST00000384690 67 ntBASIC4.09□□□□□ -1.75
CD44P16070 MIR30B-201ENST00000384850 88 ntBASIC4.09□□□□□ -1.75
CD44P16070 SNORA74.3-201ENST00000517108 154 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms