Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC024995.1-201ENST00000523014 93 ntBASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 SNORA50A-202ENST00000629536 136 ntBASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 AL021368.2-201ENST00000606125 5352 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 RNU6-478P-201ENST00000363904 110 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 RNA5SP139-201ENST00000364340 117 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 Y_RNA.567-201ENST00000384736 106 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 RNA5SP323-201ENST00000391094 133 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 SNORA48.8-201ENST00000391324 134 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 RNA5SP261-201ENST00000410536 106 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 AL357552.1-201ENST00000445254 415 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 AC115115.1-201ENST00000449927 248 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 AL031183.1-201ENST00000457667 207 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 RNU7-45P-201ENST00000459460 63 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 RNU6-871P-201ENST00000516122 100 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 RNU6-1041P-201ENST00000516254 102 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 RNU7-28P-201ENST00000516759 62 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 Y_RNA.788-201ENST00000622394 112 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 AP003355.3-201ENST00000623465 114 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 AC005336.3-201ENST00000623833 2679 ntBASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RNFT1Q5M7Z0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.16□□□□□ -1.9
RNFT1Q5M7Z0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RNFT1Q5M7Z0 Y_RNA.57-201ENST00000362806 113 ntBASIC3.16□□□□□ -1.9
RNFT1Q5M7Z0 RNA5SP42-201ENST00000364278 115 ntBASIC3.16□□□□□ -1.9
RNFT1Q5M7Z0 SNORA8-201ENST00000384574 139 ntBASIC3.16□□□□□ -1.9
RNFT1Q5M7Z0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.16□□□□□ -1.9
RNFT1Q5M7Z0 UBL5P3-201ENST00000475112 231 ntBASIC3.16□□□□□ -1.9
RNFT1Q5M7Z0 AC006483.1-201ENST00000487308 313 ntBASIC3.16□□□□□ -1.9
RNFT1Q5M7Z0 RNU6-579P-201ENST00000516879 102 ntBASIC3.16□□□□□ -1.9
RNFT1Q5M7Z0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.16□□□□□ -1.9
RNFT1Q5M7Z0 uc_338.25-201ENST00000613756 156 ntBASIC3.16□□□□□ -1.9
RNFT1Q5M7Z0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNFT1Q5M7Z0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RNFT1Q5M7Z0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
RNFT1Q5M7Z0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
RNFT1Q5M7Z0 RNU1-105P-201ENST00000363470 161 ntBASIC3.15□□□□□ -1.91
RNFT1Q5M7Z0 RNU6-424P-201ENST00000384367 105 ntBASIC3.15□□□□□ -1.91
RNFT1Q5M7Z0 MIR767-201ENST00000390228 109 ntBASIC3.15□□□□□ -1.91
RNFT1Q5M7Z0 RNU2-63P-201ENST00000410792 194 ntBASIC3.15□□□□□ -1.91
RNFT1Q5M7Z0 RPS29P28-201ENST00000446439 141 ntBASIC3.15□□□□□ -1.91
RNFT1Q5M7Z0 RNU7-34P-201ENST00000459394 64 ntBASIC3.15□□□□□ -1.91
RNFT1Q5M7Z0 RN7SL93P-201ENST00000463035 293 ntBASIC3.15□□□□□ -1.91
RNFT1Q5M7Z0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.15□□□□□ -1.91
RNFT1Q5M7Z0 RNU6-991P-201ENST00000516168 107 ntBASIC3.15□□□□□ -1.91
RNFT1Q5M7Z0 AC103810.6-201ENST00000606708 136 ntBASIC3.15□□□□□ -1.91
RNFT1Q5M7Z0 MIR7112-201ENST00000616126 65 ntBASIC3.15□□□□□ -1.91
RNFT1Q5M7Z0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RNFT1Q5M7Z0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNFT1Q5M7Z0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RNFT1Q5M7Z0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.14□□□□□ -1.91
RNFT1Q5M7Z0 RNU6-624P-201ENST00000363411 107 ntBASIC3.14□□□□□ -1.91
RNFT1Q5M7Z0 SNORA25.6-201ENST00000364121 118 ntBASIC3.14□□□□□ -1.91
RNFT1Q5M7Z0 RNU6-411P-201ENST00000384451 107 ntBASIC3.14□□□□□ -1.91
RNFT1Q5M7Z0 MIR548G-201ENST00000408442 89 ntBASIC3.14□□□□□ -1.91
RNFT1Q5M7Z0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.14□□□□□ -1.91
RNFT1Q5M7Z0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.14□□□□□ -1.91
RNFT1Q5M7Z0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.14□□□□□ -1.91
RNFT1Q5M7Z0 SNORA25.13-201ENST00000516395 103 ntBASIC3.14□□□□□ -1.91
RNFT1Q5M7Z0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.14□□□□□ -1.91
RNFT1Q5M7Z0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RNFT1Q5M7Z0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 RNU4-32P-201ENST00000363404 141 ntBASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 CD24P4-201ENST00000382840 243 ntBASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 SNORA32-201ENST00000384072 121 ntBASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 SNORA70.7-201ENST00000384159 133 ntBASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 RNU6-987P-201ENST00000384759 104 ntBASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 MIR1267-201ENST00000408723 78 ntBASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 AL161788.1-201ENST00000441805 169 ntBASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 AL513043.2-201ENST00000573941 143 ntBASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 RNU6-90P-201ENST00000606352 106 ntBASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 SNORD3E-202ENST00000627253 216 ntBASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RNFT1Q5M7Z0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 SNORA26.6-201ENST00000391256 115 ntBASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 MIR1236-201ENST00000408340 102 ntBASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 SRIP3-201ENST00000413200 219 ntBASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 RN7SL594P-201ENST00000470590 287 ntBASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 AL163195.1-201ENST00000496941 348 ntBASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 RNU6-557P-201ENST00000516842 110 ntBASIC3.12□□□□□ -1.91
RNFT1Q5M7Z0 DNAJC19P9-201ENST00000555084 351 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms