Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RNA5SP315-201ENST00000516340 116 ntBASIC4.24□□□□□ -1.73
CD44P16070 RNA5SP168-201ENST00000516642 112 ntBASIC4.24□□□□□ -1.73
CD44P16070 RNA5SP312-201ENST00000517068 116 ntBASIC4.24□□□□□ -1.73
CD44P16070 MIR466-201ENST00000580653 84 ntBASIC4.24□□□□□ -1.73
CD44P16070 AL137849.1-201ENST00000604767 169 ntBASIC4.24□□□□□ -1.73
CD44P16070 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD44P16070 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD44P16070 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CD44P16070 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.23□□□□□ -1.73
CD44P16070 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CD44P16070 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CD44P16070 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD44P16070 FO393413.1-201ENST00000402892 195 ntBASIC4.23□□□□□ -1.73
CD44P16070 RNU4-88P-201ENST00000411220 86 ntBASIC4.23□□□□□ -1.73
CD44P16070 MIR2114-201ENST00000516645 80 ntBASIC4.23□□□□□ -1.73
CD44P16070 SNORA48.11-201ENST00000517015 89 ntBASIC4.23□□□□□ -1.73
CD44P16070 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.23□□□□□ -1.73
CD44P16070 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CD44P16070 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CD44P16070 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD44P16070 SNORD113-4-201ENST00000364802 75 ntBASIC4.22□□□□□ -1.73
CD44P16070 MIR592-201ENST00000384959 97 ntBASIC4.22□□□□□ -1.73
CD44P16070 AC027119.1-201ENST00000440877 241 ntBASIC4.22□□□□□ -1.73
CD44P16070 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.22□□□□□ -1.73
CD44P16070 SCARNA14-201ENST00000516903 136 ntBASIC4.22□□□□□ -1.73
CD44P16070 CYP3A52P-201ENST00000563326 91 ntBASIC4.22□□□□□ -1.73
CD44P16070 AC006023.1-201ENST00000603944 259 ntBASIC4.22□□□□□ -1.73
CD44P16070 SNORA62.6-201ENST00000606322 83 ntBASIC4.22□□□□□ -1.73
CD44P16070 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CD44P16070 MIR6716-201ENST00000613413 80 ntBASIC4.22□□□□□ -1.73
CD44P16070 MIR6830-201ENST00000636015 70 ntBASIC4.22□□□□□ -1.73
CD44P16070 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CD44P16070 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.22□□□□□ -1.73
CD44P16070 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.22□□□□□ -1.73
CD44P16070 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD44P16070 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD44P16070 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.21□□□□□ -1.74
CD44P16070 ZNF209P-201ENST00000593450 2304 ntBASIC4.21□□□□□ -1.74
CD44P16070 MIR372-201ENST00000362225 67 ntBASIC4.21□□□□□ -1.74
CD44P16070 MIR660-201ENST00000385235 97 ntBASIC4.21□□□□□ -1.74
CD44P16070 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.21□□□□□ -1.74
CD44P16070 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CD44P16070 AC244505.7-201ENST00000599675 272 ntBASIC4.21□□□□□ -1.74
CD44P16070 MIR6500-201ENST00000622700 86 ntBASIC4.21□□□□□ -1.74
CD44P16070 RNA5SP196-201ENST00000625967 102 ntBASIC4.21□□□□□ -1.74
CD44P16070 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CD44P16070 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
CD44P16070 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CD44P16070 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CD44P16070 Y_RNA.99-201ENST00000363138 105 ntBASIC4.2□□□□□ -1.74
CD44P16070 RN7SKP220-201ENST00000410611 288 ntBASIC4.2□□□□□ -1.74
CD44P16070 CYP2C59P-201ENST00000457790 269 ntBASIC4.2□□□□□ -1.74
CD44P16070 CKS1BP2-201ENST00000497342 240 ntBASIC4.2□□□□□ -1.74
CD44P16070 MIR4700-201ENST00000578311 74 ntBASIC4.2□□□□□ -1.74
CD44P16070 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CD44P16070 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CD44P16070 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CD44P16070 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CD44P16070 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CD44P16070 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.19□□□□□ -1.74
CD44P16070 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CD44P16070 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CD44P16070 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CD44P16070 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD44P16070 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CD44P16070 RNA5SP443-201ENST00000363083 132 ntBASIC4.19□□□□□ -1.74
CD44P16070 RNU6-957P-201ENST00000363652 99 ntBASIC4.19□□□□□ -1.74
CD44P16070 RNY4P3-201ENST00000365254 95 ntBASIC4.19□□□□□ -1.74
CD44P16070 RNU6-1279P-201ENST00000383917 103 ntBASIC4.19□□□□□ -1.74
CD44P16070 RNU1-13P-201ENST00000384499 162 ntBASIC4.19□□□□□ -1.74
CD44P16070 MIR218-1-201ENST00000384999 110 ntBASIC4.19□□□□□ -1.74
CD44P16070 RNA5SP237-201ENST00000410414 113 ntBASIC4.19□□□□□ -1.74
CD44P16070 MICF-203ENST00000432679 129 ntBASIC4.19□□□□□ -1.74
CD44P16070 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.19□□□□□ -1.74
CD44P16070 RN7SKP83-201ENST00000516512 178 ntBASIC4.19□□□□□ -1.74
CD44P16070 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CD44P16070 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.19□□□□□ -1.74
CD44P16070 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.18□□□□□ -1.74
CD44P16070 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CD44P16070 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CD44P16070 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CD44P16070 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CD44P16070 RNU6-949P-201ENST00000384040 107 ntBASIC4.18□□□□□ -1.74
CD44P16070 RPS26P8-201ENST00000393490 348 ntBASIC4.18□□□□□ -1.74
CD44P16070 AL034345.1-201ENST00000407768 123 ntBASIC4.18□□□□□ -1.74
CD44P16070 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.18□□□□□ -1.74
CD44P16070 AC245517.4-201ENST00000448601 281 ntBASIC4.18□□□□□ -1.74
CD44P16070 SCARNA11.3-201ENST00000517276 130 ntBASIC4.18□□□□□ -1.74
CD44P16070 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.18□□□□□ -1.74
CD44P16070 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CD44P16070 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CD44P16070 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CD44P16070 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CD44P16070 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD44P16070 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
CD44P16070 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CD44P16070 RNU6-940P-201ENST00000363433 104 ntBASIC4.17□□□□□ -1.74
CD44P16070 SNORA70C-201ENST00000384538 135 ntBASIC4.17□□□□□ -1.74
CD44P16070 RNU1-101P-201ENST00000391171 127 ntBASIC4.17□□□□□ -1.74
CD44P16070 AL162151.2-201ENST00000448875 158 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms