Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 MIR3618-201ENST00000580330 88 ntBASIC2.61□□□□□ -1.99
U3KQE9 AC069114.2-201ENST00000604699 304 ntBASIC2.61□□□□□ -1.99
U3KQE9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.61□□□□□ -1.99
U3KQE9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
U3KQE9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
U3KQE9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
U3KQE9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
U3KQE9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
U3KQE9 SNORA1.2-201ENST00000365189 134 ntBASIC2.6□□□□□ -1.99
U3KQE9 SNORD21-201ENST00000383953 95 ntBASIC2.6□□□□□ -1.99
U3KQE9 RNU6-409P-201ENST00000384114 104 ntBASIC2.6□□□□□ -1.99
U3KQE9 SNORD17-201ENST00000390930 237 ntBASIC2.6□□□□□ -1.99
U3KQE9 RNU6ATAC-201ENST00000408749 126 ntBASIC2.6□□□□□ -1.99
U3KQE9 MIR1289-1-201ENST00000408836 144 ntBASIC2.6□□□□□ -1.99
U3KQE9 RNA5SP261-201ENST00000410536 106 ntBASIC2.6□□□□□ -1.99
U3KQE9 AC093578.1-201ENST00000415219 368 ntBASIC2.6□□□□□ -1.99
U3KQE9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.6□□□□□ -1.99
U3KQE9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.6□□□□□ -1.99
U3KQE9 ZNF861P-201ENST00000588126 639 ntBASIC2.6□□□□□ -1.99
U3KQE9 AC005000.2-201ENST00000605468 310 ntBASIC2.6□□□□□ -1.99
U3KQE9 MIR8054-201ENST00000620877 86 ntBASIC2.6□□□□□ -1.99
U3KQE9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.6□□□□□ -1.99
U3KQE9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.6□□□□□ -1.99
U3KQE9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
U3KQE9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.59□□□□□ -1.99
U3KQE9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
U3KQE9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.59□□□□□ -1.99
U3KQE9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
U3KQE9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
U3KQE9 MIRLET7C-201ENST00000362160 84 ntBASIC2.59□□□□□ -1.99
U3KQE9 RNU6-832P-201ENST00000363319 107 ntBASIC2.59□□□□□ -1.99
U3KQE9 RNU6-833P-201ENST00000363486 107 ntBASIC2.59□□□□□ -1.99
U3KQE9 RNU6-1019P-201ENST00000364424 107 ntBASIC2.59□□□□□ -1.99
U3KQE9 RNU4-16P-201ENST00000364737 141 ntBASIC2.59□□□□□ -1.99
U3KQE9 Y_RNA.377-201ENST00000365644 108 ntBASIC2.59□□□□□ -1.99
U3KQE9 AL359837.1-201ENST00000381357 287 ntBASIC2.59□□□□□ -1.99
U3KQE9 SNORD78.1-201ENST00000390866 65 ntBASIC2.59□□□□□ -1.99
U3KQE9 SNX2P2-201ENST00000424553 323 ntBASIC2.59□□□□□ -1.99
U3KQE9 STAG3L5P-204ENST00000443759 179 ntBASIC2.59□□□□□ -1.99
U3KQE9 AC109327.2-201ENST00000448339 378 ntBASIC2.59□□□□□ -1.99
U3KQE9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
U3KQE9 SNORA51-201ENST00000606420 132 ntBASIC2.59□□□□□ -1.99
U3KQE9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.59□□□□□ -1.99
U3KQE9 AC025521.1-201ENST00000621624 286 ntBASIC2.59□□□□□ -1.99
U3KQE9 MIR203B-201ENST00000636080 86 ntBASIC2.59□□□□□ -1.99
U3KQE9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.59□□□□□ -2
U3KQE9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
U3KQE9 SNORD115-2-201ENST00000362842 82 ntBASIC2.58□□□□□ -2
U3KQE9 Y_RNA.155-201ENST00000363632 101 ntBASIC2.58□□□□□ -2
U3KQE9 SNORA25.6-201ENST00000364121 118 ntBASIC2.58□□□□□ -2
U3KQE9 RNU4-67P-201ENST00000364569 141 ntBASIC2.58□□□□□ -2
U3KQE9 SNORD115-20-201ENST00000365099 82 ntBASIC2.58□□□□□ -2
U3KQE9 Y_RNA.360-201ENST00000365512 102 ntBASIC2.58□□□□□ -2
U3KQE9 RNU4-69P-201ENST00000410677 143 ntBASIC2.58□□□□□ -2
U3KQE9 AL606517.2-201ENST00000442855 241 ntBASIC2.58□□□□□ -2
U3KQE9 RNU6-1018P-201ENST00000516577 106 ntBASIC2.58□□□□□ -2
U3KQE9 IGKV2-26-201ENST00000518305 343 ntBASIC2.58□□□□□ -2
U3KQE9 AC073476.4-201ENST00000628409 72 ntBASIC2.58□□□□□ -2
U3KQE9 MIR3202-2-201ENST00000635980 79 ntBASIC2.58□□□□□ -2
U3KQE9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
U3KQE9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.58□□□□□ -2
U3KQE9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.58□□□□□ -2
U3KQE9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
U3KQE9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.57□□□□□ -2
U3KQE9 SNORD45B-201ENST00000364617 72 ntBASIC2.57□□□□□ -2
U3KQE9 MIR577-201ENST00000385196 96 ntBASIC2.57□□□□□ -2
U3KQE9 SNORD77B-201ENST00000391112 67 ntBASIC2.57□□□□□ -2
U3KQE9 AL034345.1-201ENST00000407768 123 ntBASIC2.57□□□□□ -2
U3KQE9 MIR1267-201ENST00000408723 78 ntBASIC2.57□□□□□ -2
U3KQE9 POLR2J4-204ENST00000418424 324 ntBASIC2.57□□□□□ -2
U3KQE9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.57□□□□□ -2
U3KQE9 AC015922.2-201ENST00000435593 184 ntBASIC2.57□□□□□ -2
U3KQE9 AC026403.1-201ENST00000518938 295 ntBASIC2.57□□□□□ -2
U3KQE9 MIR3152-201ENST00000579801 74 ntBASIC2.57□□□□□ -2
U3KQE9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.57□□□□□ -2
U3KQE9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
U3KQE9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
U3KQE9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
U3KQE9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
U3KQE9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
U3KQE9 MIR342-201ENST00000362212 99 ntBASIC2.56□□□□□ -2
U3KQE9 RNU4-35P-201ENST00000362588 141 ntBASIC2.56□□□□□ -2
U3KQE9 RNU6-170P-201ENST00000362832 104 ntBASIC2.56□□□□□ -2
U3KQE9 Y_RNA.290-201ENST00000364879 114 ntBASIC2.56□□□□□ -2
U3KQE9 SNORA18-201ENST00000384416 132 ntBASIC2.56□□□□□ -2
U3KQE9 RNU6-1319P-201ENST00000390855 104 ntBASIC2.56□□□□□ -2
U3KQE9 RNU6-747P-201ENST00000390928 104 ntBASIC2.56□□□□□ -2
U3KQE9 RNA5SP109-201ENST00000391010 116 ntBASIC2.56□□□□□ -2
U3KQE9 RNU6-241P-201ENST00000391148 104 ntBASIC2.56□□□□□ -2
U3KQE9 RNU6-177P-201ENST00000411257 104 ntBASIC2.56□□□□□ -2
U3KQE9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.56□□□□□ -2
U3KQE9 HMGN1P18-201ENST00000457642 277 ntBASIC2.56□□□□□ -2
U3KQE9 AC025518.1-201ENST00000479856 347 ntBASIC2.56□□□□□ -2
U3KQE9 RNU7-53P-201ENST00000516705 60 ntBASIC2.56□□□□□ -2
U3KQE9 HSPE1P19-201ENST00000603327 295 ntBASIC2.56□□□□□ -2
U3KQE9 AC064859.1-201ENST00000624741 174 ntBASIC2.56□□□□□ -2
U3KQE9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.56□□□□□ -2
U3KQE9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
U3KQE9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.55□□□□□ -2
U3KQE9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms