Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
FOXC1Q12948 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
FOXC1Q12948 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
FOXC1Q12948 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXC1Q12948 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXC1Q12948 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.44□□□□□ -1.86
FOXC1Q12948 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.44□□□□□ -1.86
FOXC1Q12948 MIRLET7C-201ENST00000362160 84 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 MIRLET7A1-201ENST00000362295 80 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 RNU1-23P-201ENST00000363361 144 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 RNA5SP322-201ENST00000363617 119 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 RNU6-987P-201ENST00000384759 104 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 MIR767-201ENST00000390228 109 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 SNORD17-201ENST00000390930 237 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 RNA5SP424-201ENST00000390988 115 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 RN7SKP192-201ENST00000411291 327 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.44□□□□□ -1.86
FOXC1Q12948 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.44□□□□□ -1.86
FOXC1Q12948 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.44□□□□□ -1.86
FOXC1Q12948 AC087499.7-201ENST00000441958 109 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 RPS29P28-201ENST00000446439 141 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.44□□□□□ -1.86
FOXC1Q12948 RNA5SP208-201ENST00000516156 78 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 MIR4672-201ENST00000583126 81 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 RPL12P50-201ENST00000603116 116 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 RNU6-90P-201ENST00000606352 106 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 MIR6717-201ENST00000622747 73 ntBASIC3.44□□□□□ -1.86
FOXC1Q12948 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXC1Q12948 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.44□□□□□ -1.86
FOXC1Q12948 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
FOXC1Q12948 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXC1Q12948 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
FOXC1Q12948 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
FOXC1Q12948 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXC1Q12948 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
FOXC1Q12948 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
FOXC1Q12948 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.43□□□□□ -1.86
FOXC1Q12948 MIR449A-201ENST00000362113 91 ntBASIC3.43□□□□□ -1.86
FOXC1Q12948 RNU4-32P-201ENST00000363404 141 ntBASIC3.43□□□□□ -1.86
FOXC1Q12948 RNU1-105P-201ENST00000363470 161 ntBASIC3.43□□□□□ -1.86
FOXC1Q12948 RNU6-411P-201ENST00000384451 107 ntBASIC3.43□□□□□ -1.86
FOXC1Q12948 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.43□□□□□ -1.86
FOXC1Q12948 AL357552.1-201ENST00000445254 415 ntBASIC3.43□□□□□ -1.86
FOXC1Q12948 TRBV12-1-201ENST00000479785 344 ntBASIC3.43□□□□□ -1.86
FOXC1Q12948 RN7SL297P-201ENST00000483161 293 ntBASIC3.43□□□□□ -1.86
FOXC1Q12948 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
FOXC1Q12948 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
FOXC1Q12948 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
FOXC1Q12948 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.42□□□□□ -1.86
FOXC1Q12948 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
FOXC1Q12948 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.42□□□□□ -1.86
FOXC1Q12948 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
FOXC1Q12948 MIR1236-201ENST00000408340 102 ntBASIC3.42□□□□□ -1.86
FOXC1Q12948 RNA5SP261-201ENST00000410536 106 ntBASIC3.42□□□□□ -1.86
FOXC1Q12948 RNU6-1328P-201ENST00000410938 106 ntBASIC3.42□□□□□ -1.86
FOXC1Q12948 AC015922.2-201ENST00000435593 184 ntBASIC3.42□□□□□ -1.86
FOXC1Q12948 AL606517.2-201ENST00000442855 241 ntBASIC3.42□□□□□ -1.86
FOXC1Q12948 RNU6-1015P-201ENST00000517121 99 ntBASIC3.42□□□□□ -1.86
FOXC1Q12948 RNU6-1116P-201ENST00000517269 99 ntBASIC3.42□□□□□ -1.86
FOXC1Q12948 SCARNA11.3-201ENST00000517276 130 ntBASIC3.42□□□□□ -1.86
FOXC1Q12948 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.42□□□□□ -1.86
FOXC1Q12948 AC027279.3-201ENST00000625055 122 ntBASIC3.42□□□□□ -1.86
FOXC1Q12948 AL137790.1-201ENST00000634283 177 ntBASIC3.42□□□□□ -1.86
FOXC1Q12948 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.42□□□□□ -1.86
FOXC1Q12948 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
FOXC1Q12948 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.41□□□□□ -1.86
FOXC1Q12948 MIR422A-201ENST00000362286 90 ntBASIC3.41□□□□□ -1.86
FOXC1Q12948 SNORA24-201ENST00000384096 131 ntBASIC3.41□□□□□ -1.86
FOXC1Q12948 RNU6-424P-201ENST00000384367 105 ntBASIC3.41□□□□□ -1.86
FOXC1Q12948 HDGFP1-201ENST00000405943 252 ntBASIC3.41□□□□□ -1.86
FOXC1Q12948 RN7SKP111-201ENST00000410349 271 ntBASIC3.41□□□□□ -1.86
FOXC1Q12948 RNU6-1190P-201ENST00000410811 104 ntBASIC3.41□□□□□ -1.86
FOXC1Q12948 CST2P1-201ENST00000425770 87 ntBASIC3.41□□□□□ -1.86
FOXC1Q12948 RNU6-871P-201ENST00000516122 100 ntBASIC3.41□□□□□ -1.86
FOXC1Q12948 DNAJC19P9-201ENST00000555084 351 ntBASIC3.41□□□□□ -1.86
FOXC1Q12948 MIR5004-201ENST00000579078 107 ntBASIC3.41□□□□□ -1.86
FOXC1Q12948 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.41□□□□□ -1.86
FOXC1Q12948 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
FOXC1Q12948 AC007336.1-201ENST00000576365 3828 ntBASIC3.41□□□□□ -1.86
FOXC1Q12948 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
FOXC1Q12948 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
FOXC1Q12948 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
FOXC1Q12948 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
FOXC1Q12948 SNORD114-6-201ENST00000364393 72 ntBASIC3.4□□□□□ -1.87
FOXC1Q12948 MIR181B2-201ENST00000385004 89 ntBASIC3.4□□□□□ -1.87
FOXC1Q12948 RNU4-37P-201ENST00000410214 84 ntBASIC3.4□□□□□ -1.87
FOXC1Q12948 AL161788.1-201ENST00000441805 169 ntBASIC3.4□□□□□ -1.87
FOXC1Q12948 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.4□□□□□ -1.87
FOXC1Q12948 RN7SL636P-201ENST00000497504 294 ntBASIC3.4□□□□□ -1.87
FOXC1Q12948 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
FOXC1Q12948 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.4□□□□□ -1.87
FOXC1Q12948 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
FOXC1Q12948 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
FOXC1Q12948 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
FOXC1Q12948 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.39□□□□□ -1.87
FOXC1Q12948 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
FOXC1Q12948 MAPK10-266ENST00000641066 6555 ntBASIC3.39□□□□□ -1.87
FOXC1Q12948 ATP5J2P3-201ENST00000451550 258 ntBASIC3.39□□□□□ -1.87
FOXC1Q12948 RNU7-53P-201ENST00000516705 60 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms