Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CLCN1P35523 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.69□□□□□ -1.82
CLCN1P35523 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CLCN1P35523 Y_RNA.344-201ENST00000365381 112 ntBASIC3.69□□□□□ -1.82
CLCN1P35523 RNU6-1104P-201ENST00000384723 104 ntBASIC3.69□□□□□ -1.82
CLCN1P35523 MIR548D2-201ENST00000384955 97 ntBASIC3.69□□□□□ -1.82
CLCN1P35523 MIR590-201ENST00000385008 97 ntBASIC3.69□□□□□ -1.82
CLCN1P35523 AL627390.1-201ENST00000396055 340 ntBASIC3.69□□□□□ -1.82
CLCN1P35523 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.69□□□□□ -1.82
CLCN1P35523 RNU6-109P-201ENST00000516364 107 ntBASIC3.69□□□□□ -1.82
CLCN1P35523 RNU6-184P-201ENST00000516514 107 ntBASIC3.69□□□□□ -1.82
CLCN1P35523 AC141557.1-201ENST00000540982 400 ntBASIC3.69□□□□□ -1.82
CLCN1P35523 U3.45-201ENST00000607547 219 ntBASIC3.69□□□□□ -1.82
CLCN1P35523 uc_338.25-201ENST00000613756 156 ntBASIC3.69□□□□□ -1.82
CLCN1P35523 AL161912.2-201ENST00000565707 3007 ntBASIC3.69□□□□□ -1.82
CLCN1P35523 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CLCN1P35523 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLCN1P35523 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLCN1P35523 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.68□□□□□ -1.82
CLCN1P35523 RNU1-70P-201ENST00000362618 164 ntBASIC3.68□□□□□ -1.82
CLCN1P35523 RNU4-16P-201ENST00000364737 141 ntBASIC3.68□□□□□ -1.82
CLCN1P35523 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCN1P35523 AC084364.2-201ENST00000546924 395 ntBASIC3.68□□□□□ -1.82
CLCN1P35523 MIR8054-201ENST00000620877 86 ntBASIC3.68□□□□□ -1.82
CLCN1P35523 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.68□□□□□ -1.82
CLCN1P35523 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLCN1P35523 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
CLCN1P35523 RNU6-49P-201ENST00000384256 107 ntBASIC3.67□□□□□ -1.82
CLCN1P35523 MIR634-201ENST00000385208 97 ntBASIC3.67□□□□□ -1.82
CLCN1P35523 SNORD17-201ENST00000390930 237 ntBASIC3.67□□□□□ -1.82
CLCN1P35523 SNORA19.1-201ENST00000410656 129 ntBASIC3.67□□□□□ -1.82
CLCN1P35523 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCN1P35523 CST9LP2-201ENST00000437612 320 ntBASIC3.67□□□□□ -1.82
CLCN1P35523 AC025518.1-201ENST00000479856 347 ntBASIC3.67□□□□□ -1.82
CLCN1P35523 RNU6-1116P-201ENST00000517269 99 ntBASIC3.67□□□□□ -1.82
CLCN1P35523 MIR3683-201ENST00000580847 82 ntBASIC3.67□□□□□ -1.82
CLCN1P35523 MIR3922-201ENST00000585192 84 ntBASIC3.67□□□□□ -1.82
CLCN1P35523 SNORA28-201ENST00000606769 126 ntBASIC3.67□□□□□ -1.82
CLCN1P35523 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLCN1P35523 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLCN1P35523 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLCN1P35523 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CLCN1P35523 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CLCN1P35523 Y_RNA.558-201ENST00000384685 113 ntBASIC3.66□□□□□ -1.82
CLCN1P35523 MIR34B-201ENST00000385076 84 ntBASIC3.66□□□□□ -1.82
CLCN1P35523 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.66□□□□□ -1.82
CLCN1P35523 HSPE1P19-201ENST00000603327 295 ntBASIC3.66□□□□□ -1.82
CLCN1P35523 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.66□□□□□ -1.82
CLCN1P35523 RNU4-35P-201ENST00000362588 141 ntBASIC3.65□□□□□ -1.83
CLCN1P35523 Y_RNA.241-201ENST00000364470 117 ntBASIC3.65□□□□□ -1.83
CLCN1P35523 RNU2-35P-201ENST00000516446 142 ntBASIC3.65□□□□□ -1.83
CLCN1P35523 IGKV2-26-201ENST00000518305 343 ntBASIC3.65□□□□□ -1.83
CLCN1P35523 AC026403.1-201ENST00000518938 295 ntBASIC3.65□□□□□ -1.83
CLCN1P35523 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCN1P35523 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCN1P35523 AC078899.2-201ENST00000595282 212 ntBASIC3.65□□□□□ -1.83
CLCN1P35523 AC005000.2-201ENST00000605468 310 ntBASIC3.65□□□□□ -1.83
CLCN1P35523 MIR7851-201ENST00000610611 160 ntBASIC3.65□□□□□ -1.83
CLCN1P35523 Y_RNA.818-201ENST00000618813 71 ntBASIC3.65□□□□□ -1.83
CLCN1P35523 AC073346.2-201ENST00000624724 2058 ntBASIC3.65□□□□□ -1.83
CLCN1P35523 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLCN1P35523 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
CLCN1P35523 SNORA25.6-201ENST00000364121 118 ntBASIC3.64□□□□□ -1.83
CLCN1P35523 SNORD88.1-201ENST00000408684 91 ntBASIC3.64□□□□□ -1.83
CLCN1P35523 RN7SKP111-201ENST00000410349 271 ntBASIC3.64□□□□□ -1.83
CLCN1P35523 RPL39P25-201ENST00000449384 154 ntBASIC3.64□□□□□ -1.83
CLCN1P35523 AC005786.1-201ENST00000588553 154 ntBASIC3.64□□□□□ -1.83
CLCN1P35523 AC069114.2-201ENST00000604699 304 ntBASIC3.64□□□□□ -1.83
CLCN1P35523 AC022513.1-201ENST00000624512 117 ntBASIC3.64□□□□□ -1.83
CLCN1P35523 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
CLCN1P35523 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.63□□□□□ -1.83
CLCN1P35523 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLCN1P35523 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCN1P35523 Y_RNA.78-201ENST00000362970 110 ntBASIC3.63□□□□□ -1.83
CLCN1P35523 RNA5SP72-201ENST00000364442 117 ntBASIC3.63□□□□□ -1.83
CLCN1P35523 SNORA27-201ENST00000384323 126 ntBASIC3.63□□□□□ -1.83
CLCN1P35523 MIR627-201ENST00000384979 97 ntBASIC3.63□□□□□ -1.83
CLCN1P35523 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCN1P35523 AL035398.1-201ENST00000430869 322 ntBASIC3.63□□□□□ -1.83
CLCN1P35523 RNU7-6P-201ENST00000516845 62 ntBASIC3.63□□□□□ -1.83
CLCN1P35523 MIR3200-201ENST00000580767 85 ntBASIC3.63□□□□□ -1.83
CLCN1P35523 AL162726.3-218ENST00000636401 95 ntBASIC3.63□□□□□ -1.83
CLCN1P35523 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.63□□□□□ -1.83
CLCN1P35523 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCN1P35523 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLCN1P35523 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
CLCN1P35523 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCN1P35523 MIR488-201ENST00000365739 83 ntBASIC3.62□□□□□ -1.83
CLCN1P35523 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLCN1P35523 SNORA26.2-201ENST00000390922 122 ntBASIC3.62□□□□□ -1.83
CLCN1P35523 RN7SKP200-201ENST00000410564 320 ntBASIC3.62□□□□□ -1.83
CLCN1P35523 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.62□□□□□ -1.83
CLCN1P35523 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.62□□□□□ -1.83
CLCN1P35523 MIR4298-201ENST00000584380 73 ntBASIC3.62□□□□□ -1.83
CLCN1P35523 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.62□□□□□ -1.83
CLCN1P35523 AC108206.1-201ENST00000570186 4159 ntBASIC3.62□□□□□ -1.83
CLCN1P35523 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.62□□□□□ -1.83
CLCN1P35523 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLCN1P35523 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CLCN1P35523 MIR302B-201ENST00000362188 73 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms