Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RCCD1A6NED2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RCCD1A6NED2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.66□□□□□ -1.82
RCCD1A6NED2 PWAR6-201ENST00000552334 4618 ntBASIC3.66□□□□□ -1.82
RCCD1A6NED2 Y_RNA.171-201ENST00000363760 102 ntBASIC3.66□□□□□ -1.82
RCCD1A6NED2 SNORD6-201ENST00000365444 73 ntBASIC3.66□□□□□ -1.82
RCCD1A6NED2 RNU6-1296P-201ENST00000383879 107 ntBASIC3.66□□□□□ -1.82
RCCD1A6NED2 HMGN1P18-201ENST00000457642 277 ntBASIC3.66□□□□□ -1.82
RCCD1A6NED2 RNU7-171P-201ENST00000459581 62 ntBASIC3.66□□□□□ -1.82
RCCD1A6NED2 RPS29P12-201ENST00000460178 152 ntBASIC3.66□□□□□ -1.82
RCCD1A6NED2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.66□□□□□ -1.82
RCCD1A6NED2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.66□□□□□ -1.82
RCCD1A6NED2 AL442644.1-201ENST00000454390 3105 ntBASIC3.66□□□□□ -1.82
RCCD1A6NED2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RCCD1A6NED2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RCCD1A6NED2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.66□□□□□ -1.82
RCCD1A6NED2 AC096644.4-201ENST00000563417 2912 ntBASIC3.66□□□□□ -1.82
RCCD1A6NED2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RCCD1A6NED2 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RCCD1A6NED2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RCCD1A6NED2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.82
RCCD1A6NED2 MIRLET7C-201ENST00000362160 84 ntBASIC3.65□□□□□ -1.83
RCCD1A6NED2 RNU6-616P-201ENST00000384353 107 ntBASIC3.65□□□□□ -1.83
RCCD1A6NED2 ATP5A1P2-201ENST00000412323 255 ntBASIC3.65□□□□□ -1.83
RCCD1A6NED2 AC093578.1-201ENST00000415219 368 ntBASIC3.65□□□□□ -1.83
RCCD1A6NED2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.65□□□□□ -1.83
RCCD1A6NED2 RNU7-181P-201ENST00000517234 74 ntBASIC3.65□□□□□ -1.83
RCCD1A6NED2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.65□□□□□ -1.83
RCCD1A6NED2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RCCD1A6NED2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RCCD1A6NED2 AC091152.2-201ENST00000591628 2569 ntBASIC3.64□□□□□ -1.83
RCCD1A6NED2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.64□□□□□ -1.83
RCCD1A6NED2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.64□□□□□ -1.83
RCCD1A6NED2 RNU6-219P-201ENST00000364728 107 ntBASIC3.64□□□□□ -1.83
RCCD1A6NED2 MIR23B-201ENST00000384832 97 ntBASIC3.64□□□□□ -1.83
RCCD1A6NED2 RNA5SP293-201ENST00000410527 113 ntBASIC3.64□□□□□ -1.83
RCCD1A6NED2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.64□□□□□ -1.83
RCCD1A6NED2 RNU1-143P-201ENST00000516296 146 ntBASIC3.64□□□□□ -1.83
RCCD1A6NED2 RNA5SP33-201ENST00000516687 98 ntBASIC3.64□□□□□ -1.83
RCCD1A6NED2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.64□□□□□ -1.83
RCCD1A6NED2 MIR3169-201ENST00000578032 83 ntBASIC3.64□□□□□ -1.83
RCCD1A6NED2 MIR4439-201ENST00000583746 80 ntBASIC3.64□□□□□ -1.83
RCCD1A6NED2 U1.23-201ENST00000610293 146 ntBASIC3.64□□□□□ -1.83
RCCD1A6NED2 RNU1-68P-201ENST00000615382 146 ntBASIC3.64□□□□□ -1.83
RCCD1A6NED2 U1.39-201ENST00000621562 146 ntBASIC3.64□□□□□ -1.83
RCCD1A6NED2 AL512310.12-203ENST00000640543 90 ntBASIC3.64□□□□□ -1.83
RCCD1A6NED2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RCCD1A6NED2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.64□□□□□ -1.83
RCCD1A6NED2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.64□□□□□ -1.83
RCCD1A6NED2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RCCD1A6NED2 RNU6-23P-201ENST00000363283 107 ntBASIC3.63□□□□□ -1.83
RCCD1A6NED2 SNORD56.3-201ENST00000363507 71 ntBASIC3.63□□□□□ -1.83
RCCD1A6NED2 SNORA1.2-201ENST00000365189 134 ntBASIC3.63□□□□□ -1.83
RCCD1A6NED2 Y_RNA.437-201ENST00000384113 113 ntBASIC3.63□□□□□ -1.83
RCCD1A6NED2 SNORA70.7-201ENST00000384159 133 ntBASIC3.63□□□□□ -1.83
RCCD1A6NED2 Y_RNA.467-201ENST00000384297 102 ntBASIC3.63□□□□□ -1.83
RCCD1A6NED2 RNU2-40P-201ENST00000410833 196 ntBASIC3.63□□□□□ -1.83
RCCD1A6NED2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.63□□□□□ -1.83
RCCD1A6NED2 RNU7-45P-201ENST00000459460 63 ntBASIC3.63□□□□□ -1.83
RCCD1A6NED2 RNU6-521P-201ENST00000516663 105 ntBASIC3.63□□□□□ -1.83
RCCD1A6NED2 RNU6-267P-201ENST00000516714 103 ntBASIC3.63□□□□□ -1.83
RCCD1A6NED2 RNU6-1258P-201ENST00000516911 111 ntBASIC3.63□□□□□ -1.83
RCCD1A6NED2 MIR548AE2-201ENST00000583456 67 ntBASIC3.63□□□□□ -1.83
RCCD1A6NED2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RCCD1A6NED2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RCCD1A6NED2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RCCD1A6NED2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.62□□□□□ -1.83
RCCD1A6NED2 Y_RNA.426-201ENST00000384068 113 ntBASIC3.62□□□□□ -1.83
RCCD1A6NED2 RNA5SP261-201ENST00000410536 106 ntBASIC3.62□□□□□ -1.83
RCCD1A6NED2 Z92545.1-201ENST00000411782 234 ntBASIC3.62□□□□□ -1.83
RCCD1A6NED2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.62□□□□□ -1.83
RCCD1A6NED2 RNU6-65P-201ENST00000516332 98 ntBASIC3.62□□□□□ -1.83
RCCD1A6NED2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.62□□□□□ -1.83
RCCD1A6NED2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.62□□□□□ -1.83
RCCD1A6NED2 MIR3158-1-201ENST00000583596 81 ntBASIC3.62□□□□□ -1.83
RCCD1A6NED2 MIR3616-201ENST00000584070 92 ntBASIC3.62□□□□□ -1.83
RCCD1A6NED2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
RCCD1A6NED2 SNORA22.1-201ENST00000362701 134 ntBASIC3.61□□□□□ -1.83
RCCD1A6NED2 RNU6-1125P-201ENST00000363601 107 ntBASIC3.61□□□□□ -1.83
RCCD1A6NED2 SNORD116-10-201ENST00000363791 102 ntBASIC3.61□□□□□ -1.83
RCCD1A6NED2 Y_RNA.313-201ENST00000365095 103 ntBASIC3.61□□□□□ -1.83
RCCD1A6NED2 MIR200C-201ENST00000384980 68 ntBASIC3.61□□□□□ -1.83
RCCD1A6NED2 AL133547.1-201ENST00000448546 220 ntBASIC3.61□□□□□ -1.83
RCCD1A6NED2 RNU6-857P-201ENST00000515893 110 ntBASIC3.61□□□□□ -1.83
RCCD1A6NED2 SNORA64.4-201ENST00000516632 81 ntBASIC3.61□□□□□ -1.83
RCCD1A6NED2 SNORA67.7-201ENST00000516664 135 ntBASIC3.61□□□□□ -1.83
RCCD1A6NED2 MIR4668-201ENST00000582284 70 ntBASIC3.61□□□□□ -1.83
RCCD1A6NED2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RCCD1A6NED2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RCCD1A6NED2 RNU6-1313P-201ENST00000362622 102 ntBASIC3.6□□□□□ -1.83
RCCD1A6NED2 Y_RNA.470-201ENST00000384307 117 ntBASIC3.6□□□□□ -1.83
RCCD1A6NED2 Y_RNA.620-201ENST00000411009 88 ntBASIC3.6□□□□□ -1.83
RCCD1A6NED2 AL035423.1-201ENST00000420331 213 ntBASIC3.6□□□□□ -1.83
RCCD1A6NED2 RNU7-53P-201ENST00000516705 60 ntBASIC3.6□□□□□ -1.83
RCCD1A6NED2 MIR3186-201ENST00000577404 85 ntBASIC3.6□□□□□ -1.83
RCCD1A6NED2 MIR4429-201ENST00000580105 73 ntBASIC3.6□□□□□ -1.83
RCCD1A6NED2 MIR92B-201ENST00000607575 96 ntBASIC3.6□□□□□ -1.83
RCCD1A6NED2 AL356274.2-201ENST00000624379 3752 ntBASIC3.6□□□□□ -1.83
RCCD1A6NED2 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RCCD1A6NED2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms