Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 RARRES2P2-201ENST00000394842 485 ntBASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 AC103834.1-201ENST00000520383 144 ntBASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 MIR4449-201ENST00000578365 66 ntBASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAPPC1Q9Y5R8 AL118508.1-201ENST00000613502 2345 ntBASIC14.33□□□□□ -0.11
TRAPPC1Q9Y5R8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
TRAPPC1Q9Y5R8 NKILA-202ENST00000614771 2598 ntBASIC14.33□□□□□ -0.11
TRAPPC1Q9Y5R8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.33□□□□□ -0.11
TRAPPC1Q9Y5R8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
TRAPPC1Q9Y5R8 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
TRAPPC1Q9Y5R8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAPPC1Q9Y5R8 KRT8P17-201ENST00000453110 1448 ntBASIC14.33□□□□□ -0.11
TRAPPC1Q9Y5R8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAPPC1Q9Y5R8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
TRAPPC1Q9Y5R8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAPPC1Q9Y5R8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 SLC47A1P1-202ENST00000449666 945 ntBASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 AC092171.4-201ENST00000609130 632 ntBASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 AC108860.2-201ENST00000562760 2183 ntBASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAPPC1Q9Y5R8 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 SLC25A6P5-201ENST00000435663 894 ntBASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 AC011676.5-201ENST00000624864 2660 ntBASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAPPC1Q9Y5R8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAPPC1Q9Y5R8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms