Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 AC009078.2-202ENST00000463353 338 ntBASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHAC2Q9Y5I4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHAC2Q9Y5I4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
PCDHAC2Q9Y5I4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PCDHAC2Q9Y5I4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHAC2Q9Y5I4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHAC2Q9Y5I4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHAC2Q9Y5I4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PCDHAC2Q9Y5I4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.46■■□□□ 1.19
PCDHAC2Q9Y5I4 AC111152.3-201ENST00000569699 673 ntBASIC22.46■■□□□ 1.19
PCDHAC2Q9Y5I4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHAC2Q9Y5I4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHAC2Q9Y5I4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHAC2Q9Y5I4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.45■■□□□ 1.19
PCDHAC2Q9Y5I4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHAC2Q9Y5I4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHAC2Q9Y5I4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHAC2Q9Y5I4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHAC2Q9Y5I4 KRT18P23-201ENST00000435622 1283 ntBASIC22.45■■□□□ 1.18
PCDHAC2Q9Y5I4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC22.45■■□□□ 1.18
PCDHAC2Q9Y5I4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
PCDHAC2Q9Y5I4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
PCDHAC2Q9Y5I4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHAC2Q9Y5I4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
PCDHAC2Q9Y5I4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHAC2Q9Y5I4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHAC2Q9Y5I4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHAC2Q9Y5I4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 LINC00265-3P-201ENST00000447588 903 ntBASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 KRT8P10-201ENST00000450021 1447 ntBASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 AP000867.3-201ENST00000524675 377 ntBASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 PNN-202ENST00000553331 656 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.44■■□□□ 1.18
PCDHAC2Q9Y5I4 CLDN5-201ENST00000403084 2357 ntBASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 AL109659.2-201ENST00000606809 1674 ntBASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 AC004870.1-201ENST00000315132 882 ntBASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 AL031008.1-201ENST00000619963 541 ntBASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHAC2Q9Y5I4 Z83836.1-201ENST00000624605 1642 ntBASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 TSPY19P-201ENST00000418461 509 ntBASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 TSPY18P-201ENST00000441642 509 ntBASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 NUS1P1-201ENST00000446295 882 ntBASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 AC079781.3-201ENST00000449110 356 ntBASIC22.42■■□□□ 1.18
PCDHAC2Q9Y5I4 KRT17P6-201ENST00000453795 1220 ntBASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms