Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 KRT16P2-201ENST00000414673 1423 ntBASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LRCH1Q9Y2L9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LRCH1Q9Y2L9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 KRT8P17-201ENST00000453110 1448 ntBASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.95■□□□□ 0.46
LRCH1Q9Y2L9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 PTBP1P-201ENST00000554374 1601 ntBASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRCH1Q9Y2L9 NKILA-202ENST00000614771 2598 ntBASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 AC008894.3-201ENST00000624324 3103 ntBASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRCH1Q9Y2L9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRCH1Q9Y2L9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms