Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 PPIH-202ENST00000372549 327 ntTSL 3 BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 CHCHD2P8-201ENST00000429873 447 ntBASIC24.67■■□□□ 1.54
SPG7Q9UQ90 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC24.67■■□□□ 1.54
SPG7Q9UQ90 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 KRT18P23-201ENST00000435622 1283 ntBASIC24.66■■□□□ 1.54
SPG7Q9UQ90 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SPG7Q9UQ90 PWWP2AP1-201ENST00000429776 2273 ntBASIC24.65■■□□□ 1.54
SPG7Q9UQ90 KATNBL1P6-202ENST00000562413 1466 ntBASIC24.65■■□□□ 1.54
SPG7Q9UQ90 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC24.65■■□□□ 1.54
SPG7Q9UQ90 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC24.65■■□□□ 1.54
SPG7Q9UQ90 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SPG7Q9UQ90 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC24.65■■□□□ 1.54
SPG7Q9UQ90 TSPY22P-201ENST00000427496 604 ntBASIC24.65■■□□□ 1.54
SPG7Q9UQ90 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SPG7Q9UQ90 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC24.65■■□□□ 1.54
SPG7Q9UQ90 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC24.65■■□□□ 1.54
SPG7Q9UQ90 RN7SL510P-201ENST00000581311 263 ntBASIC24.65■■□□□ 1.54
SPG7Q9UQ90 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC24.65■■□□□ 1.54
SPG7Q9UQ90 AC073130.3-201ENST00000624389 2278 ntBASIC24.65■■□□□ 1.54
SPG7Q9UQ90 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC24.65■■□□□ 1.54
SPG7Q9UQ90 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SPG7Q9UQ90 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
SPG7Q9UQ90 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC24.65■■□□□ 1.54
SPG7Q9UQ90 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 AC008556.1-201ENST00000610908 2040 ntBASIC24.64■■□□□ 1.54
SPG7Q9UQ90 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 HOXB1-202ENST00000577092 1414 ntBASIC24.64■■□□□ 1.54
SPG7Q9UQ90 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 AC104390.1-201ENST00000555663 520 ntBASIC24.64■■□□□ 1.54
SPG7Q9UQ90 IL11-204ENST00000590625 1028 ntTSL 2 BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC24.64■■□□□ 1.54
SPG7Q9UQ90 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SPG7Q9UQ90 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
SPG7Q9UQ90 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SPG7Q9UQ90 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
SPG7Q9UQ90 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SPG7Q9UQ90 TREX1-205ENST00000625293 1783 ntBASIC24.64■■□□□ 1.53
SPG7Q9UQ90 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
SPG7Q9UQ90 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SPG7Q9UQ90 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
SPG7Q9UQ90 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC24.64■■□□□ 1.53
SPG7Q9UQ90 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 AC111152.3-201ENST00000569699 673 ntBASIC24.63■■□□□ 1.53
SPG7Q9UQ90 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms