Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 AC093458.2-201ENST00000623150 629 ntBASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.57□□□□□ -0.08
NOTCH3Q9UM47 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 AL512408.1-201ENST00000569378 2000 ntBASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 AC111152.3-201ENST00000569699 673 ntBASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 NEK4P2-201ENST00000580004 1012 ntBASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NOTCH3Q9UM47 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 AP000523.1-201ENST00000398242 1049 ntBASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 STARP1-201ENST00000397973 869 ntBASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 VENTXP5-201ENST00000523979 775 ntBASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NOTCH3Q9UM47 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms