Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC24.03■■□□□ 1.44
CCNL1Q9UK58 AL109659.2-201ENST00000606809 1674 ntBASIC24.03■■□□□ 1.44
CCNL1Q9UK58 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCNL1Q9UK58 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCNL1Q9UK58 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC24.03■■□□□ 1.44
CCNL1Q9UK58 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCNL1Q9UK58 AP005901.3-202ENST00000581653 237 ntBASIC24.03■■□□□ 1.44
CCNL1Q9UK58 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC24.03■■□□□ 1.44
CCNL1Q9UK58 IGHV3OR16-7-201ENST00000604106 360 ntBASIC24.03■■□□□ 1.44
CCNL1Q9UK58 ABBA01031661.1-201ENST00000634362 1253 ntBASIC24.03■■□□□ 1.44
CCNL1Q9UK58 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCNL1Q9UK58 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CCNL1Q9UK58 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCNL1Q9UK58 AL162377.1-201ENST00000618844 1793 ntBASIC24.03■■□□□ 1.44
CCNL1Q9UK58 AC008556.1-201ENST00000610908 2040 ntBASIC24.03■■□□□ 1.44
CCNL1Q9UK58 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.03■■□□□ 1.44
CCNL1Q9UK58 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC24.02■■□□□ 1.44
CCNL1Q9UK58 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCNL1Q9UK58 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CCNL1Q9UK58 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCNL1Q9UK58 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCNL1Q9UK58 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCNL1Q9UK58 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC24.02■■□□□ 1.44
CCNL1Q9UK58 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC24.02■■□□□ 1.44
CCNL1Q9UK58 AC092865.5-201ENST00000545435 363 ntBASIC24.02■■□□□ 1.44
CCNL1Q9UK58 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CCNL1Q9UK58 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
CCNL1Q9UK58 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CCNL1Q9UK58 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCNL1Q9UK58 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 RCC2P3-201ENST00000418112 1537 ntBASIC24.01■■□□□ 1.43
CCNL1Q9UK58 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 IGHGP-201ENST00000390555 1178 ntBASIC24.01■■□□□ 1.43
CCNL1Q9UK58 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 RN7SL606P-201ENST00000472779 293 ntBASIC24.01■■□□□ 1.43
CCNL1Q9UK58 GUSBP12-201ENST00000513727 720 ntBASIC24.01■■□□□ 1.43
CCNL1Q9UK58 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNL1Q9UK58 PBK-203ENST00000522944 1499 ntTSL 2 BASIC24■■□□□ 1.43
CCNL1Q9UK58 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC24■■□□□ 1.43
CCNL1Q9UK58 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCNL1Q9UK58 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CCNL1Q9UK58 FAM197Y8-203ENST00000450145 560 ntBASIC24■■□□□ 1.43
CCNL1Q9UK58 AC091607.1-201ENST00000490318 1060 ntBASIC24■■□□□ 1.43
CCNL1Q9UK58 KRT18P58-201ENST00000527480 1120 ntBASIC24■■□□□ 1.43
CCNL1Q9UK58 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
CCNL1Q9UK58 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC24■■□□□ 1.43
CCNL1Q9UK58 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC24■■□□□ 1.43
CCNL1Q9UK58 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCNL1Q9UK58 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CCNL1Q9UK58 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC24■■□□□ 1.43
CCNL1Q9UK58 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CCNL1Q9UK58 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24■■□□□ 1.43
CCNL1Q9UK58 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCNL1Q9UK58 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC24■■□□□ 1.43
CCNL1Q9UK58 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24■■□□□ 1.43
CCNL1Q9UK58 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CCNL1Q9UK58 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 MIR1233-2-201ENST00000408138 82 ntBASIC23.99■■□□□ 1.43
CCNL1Q9UK58 MIR1233-1-201ENST00000408722 82 ntBASIC23.99■■□□□ 1.43
CCNL1Q9UK58 VENTXP7-201ENST00000475503 772 ntBASIC23.99■■□□□ 1.43
CCNL1Q9UK58 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CCNL1Q9UK58 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCNL1Q9UK58 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCNL1Q9UK58 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCNL1Q9UK58 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCNL1Q9UK58 AL031284.1-201ENST00000419297 478 ntBASIC23.98■■□□□ 1.43
CCNL1Q9UK58 AC092183.1-201ENST00000469884 875 ntBASIC23.98■■□□□ 1.43
CCNL1Q9UK58 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC23.98■■□□□ 1.43
CCNL1Q9UK58 CDV3-207ENST00000508481 661 ntTSL 3 BASIC23.98■■□□□ 1.43
CCNL1Q9UK58 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCNL1Q9UK58 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.98■■□□□ 1.43
CCNL1Q9UK58 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms