Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 KRT8P11-201ENST00000409686 1436 ntBASIC18.78■□□□□ 0.6
SPASTQ9UBP0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 TSPY5P-201ENST00000426936 936 ntBASIC18.78■□□□□ 0.6
SPASTQ9UBP0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 AC092647.4-201ENST00000457211 535 ntBASIC18.78■□□□□ 0.6
SPASTQ9UBP0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 AP003041.3-201ENST00000527151 707 ntBASIC18.78■□□□□ 0.6
SPASTQ9UBP0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.78■□□□□ 0.6
SPASTQ9UBP0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.77■□□□□ 0.6
SPASTQ9UBP0 AC116562.4-201ENST00000641316 2276 ntBASIC18.77■□□□□ 0.6
SPASTQ9UBP0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.77■□□□□ 0.6
SPASTQ9UBP0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 FAM8A6P-201ENST00000407496 1135 ntBASIC18.77■□□□□ 0.6
SPASTQ9UBP0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPASTQ9UBP0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPASTQ9UBP0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPASTQ9UBP0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.77■□□□□ 0.59
SPASTQ9UBP0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPASTQ9UBP0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 AC020763.4-201ENST00000623414 4170 ntBASIC18.76■□□□□ 0.59
SPASTQ9UBP0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 AC140113.3-201ENST00000605663 199 ntBASIC18.76■□□□□ 0.59
SPASTQ9UBP0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SPASTQ9UBP0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms