Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 FITM1-202ENST00000559294 800 ntBASIC17.67■□□□□ 0.42
CNIH4Q9P003 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 AP000525.1-201ENST00000608286 694 ntBASIC17.67■□□□□ 0.42
CNIH4Q9P003 AP000692.2-201ENST00000608391 879 ntBASIC17.67■□□□□ 0.42
CNIH4Q9P003 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.67■□□□□ 0.42
CNIH4Q9P003 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNIH4Q9P003 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.66■□□□□ 0.42
CNIH4Q9P003 CROCCP3-202ENST00000420820 1947 ntBASIC17.66■□□□□ 0.42
CNIH4Q9P003 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 MIR1238-201ENST00000408483 83 ntBASIC17.66■□□□□ 0.42
CNIH4Q9P003 AC087499.1-201ENST00000418141 1075 ntBASIC17.66■□□□□ 0.42
CNIH4Q9P003 FAM207BP-201ENST00000447172 505 ntBASIC17.66■□□□□ 0.42
CNIH4Q9P003 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.66■□□□□ 0.42
CNIH4Q9P003 AP005242.2-201ENST00000580065 1175 ntBASIC17.66■□□□□ 0.42
CNIH4Q9P003 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.66■□□□□ 0.42
CNIH4Q9P003 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.66■□□□□ 0.42
CNIH4Q9P003 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CNIH4Q9P003 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CNIH4Q9P003 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNIH4Q9P003 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CNIH4Q9P003 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CNIH4Q9P003 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNIH4Q9P003 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNIH4Q9P003 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.65■□□□□ 0.42
CNIH4Q9P003 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNIH4Q9P003 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNIH4Q9P003 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.65■□□□□ 0.42
CNIH4Q9P003 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNIH4Q9P003 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNIH4Q9P003 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CNIH4Q9P003 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNIH4Q9P003 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CNIH4Q9P003 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNIH4Q9P003 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CNIH4Q9P003 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CNIH4Q9P003 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.65■□□□□ 0.42
CNIH4Q9P003 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNIH4Q9P003 AC091390.4-202ENST00000476426 537 ntBASIC17.65■□□□□ 0.42
CNIH4Q9P003 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNIH4Q9P003 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.65■□□□□ 0.42
CNIH4Q9P003 AC097488.1-201ENST00000507834 756 ntBASIC17.65■□□□□ 0.42
CNIH4Q9P003 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNIH4Q9P003 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNIH4Q9P003 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CNIH4Q9P003 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.65■□□□□ 0.42
CNIH4Q9P003 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNIH4Q9P003 AC006333.2-201ENST00000607957 2099 ntBASIC17.65■□□□□ 0.42
CNIH4Q9P003 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNIH4Q9P003 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CNIH4Q9P003 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CNIH4Q9P003 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CNIH4Q9P003 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
CNIH4Q9P003 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CNIH4Q9P003 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CNIH4Q9P003 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CNIH4Q9P003 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNIH4Q9P003 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNIH4Q9P003 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CNIH4Q9P003 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.64■□□□□ 0.41
CNIH4Q9P003 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNIH4Q9P003 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CNIH4Q9P003 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms