Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 AL355802.2-201ENST00000402069 882 ntBASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 AC026366.1-201ENST00000488803 879 ntBASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
THUMPD1Q9NXG2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 AC069544.1-201ENST00000609399 999 ntBASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.44
THUMPD1Q9NXG2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
THUMPD1Q9NXG2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.77■□□□□ 0.43
THUMPD1Q9NXG2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.77■□□□□ 0.43
THUMPD1Q9NXG2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
THUMPD1Q9NXG2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.77■□□□□ 0.43
THUMPD1Q9NXG2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.77■□□□□ 0.43
THUMPD1Q9NXG2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.77■□□□□ 0.43
THUMPD1Q9NXG2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.77■□□□□ 0.43
THUMPD1Q9NXG2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
THUMPD1Q9NXG2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
THUMPD1Q9NXG2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.77■□□□□ 0.43
THUMPD1Q9NXG2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
THUMPD1Q9NXG2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 AL354751.1-201ENST00000412768 1863 ntBASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 KRT16P5-201ENST00000455284 522 ntBASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 AL133373.2-201ENST00000623187 2828 ntBASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
THUMPD1Q9NXG2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
THUMPD1Q9NXG2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.75■□□□□ 0.43
THUMPD1Q9NXG2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THUMPD1Q9NXG2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
THUMPD1Q9NXG2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms