Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 AC016734.2-201ENST00000624325 1377 ntBASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 AC009078.2-202ENST00000463353 338 ntBASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 AC092597.1-201ENST00000487352 616 ntBASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 MIR4674-201ENST00000582457 87 ntBASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.16■□□□□ 0.98
PDLIM7Q9NR12 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 AP002383.4-201ENST00000442518 975 ntBASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 AL121672.3-201ENST00000608644 468 ntBASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.15■□□□□ 0.98
PDLIM7Q9NR12 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDLIM7Q9NR12 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PDLIM7Q9NR12 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.14■□□□□ 0.98
PDLIM7Q9NR12 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 AC011498.5-201ENST00000592027 486 ntBASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 IFNL4P1-201ENST00000607083 540 ntBASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PDLIM7Q9NR12 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 AL022342.1-201ENST00000400363 863 ntBASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 BX276092.5-203ENST00000456199 560 ntBASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 RASA4DP-201ENST00000460726 1199 ntBASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.13■□□□□ 0.97
PDLIM7Q9NR12 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.12■□□□□ 0.97
PDLIM7Q9NR12 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms