Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
C12orf4Q9NQ89 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.42■□□□□ 0.22
C12orf4Q9NQ89 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
C12orf4Q9NQ89 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 LSM12P1-201ENST00000411836 588 ntBASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 AC093787.1-201ENST00000450396 207 ntBASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
C12orf4Q9NQ89 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
C12orf4Q9NQ89 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.39■□□□□ 0.22
C12orf4Q9NQ89 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.39■□□□□ 0.22
C12orf4Q9NQ89 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
C12orf4Q9NQ89 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
C12orf4Q9NQ89 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 AC005181.1-201ENST00000604782 1256 ntBASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
C12orf4Q9NQ89 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms