Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.16■□□□□ 0.34
HMG20AQ9NP66 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.16■□□□□ 0.34
HMG20AQ9NP66 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMG20AQ9NP66 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 PGM5P4-201ENST00000421970 445 ntBASIC17.15■□□□□ 0.34
HMG20AQ9NP66 AC026271.2-201ENST00000428091 497 ntBASIC17.15■□□□□ 0.34
HMG20AQ9NP66 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 AC007322.4-201ENST00000509611 723 ntBASIC17.15■□□□□ 0.34
HMG20AQ9NP66 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 AL162412.1-201ENST00000567129 965 ntBASIC17.15■□□□□ 0.34
HMG20AQ9NP66 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 AC013268.1-206ENST00000638368 961 ntBASIC17.15■□□□□ 0.34
HMG20AQ9NP66 AC112229.1-201ENST00000639295 961 ntBASIC17.15■□□□□ 0.34
HMG20AQ9NP66 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMG20AQ9NP66 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
HMG20AQ9NP66 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.14■□□□□ 0.34
HMG20AQ9NP66 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.14■□□□□ 0.34
HMG20AQ9NP66 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
HMG20AQ9NP66 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 TEX21P-204ENST00000641479 1693 ntBASIC17.14■□□□□ 0.33
HMG20AQ9NP66 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 RARRES2P6-201ENST00000567333 442 ntBASIC17.14■□□□□ 0.33
HMG20AQ9NP66 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMG20AQ9NP66 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms