Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 AC068338.2-201ENST00000563278 1430 ntBASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 HES2-205ENST00000487437 968 ntTSL 3 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 AC069236.1-201ENST00000604339 616 ntBASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SND1-IT1Q9HBX3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 MIR638-201ENST00000385237 100 ntBASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 AL355472.2-201ENST00000422958 438 ntBASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 AC008694.1-202ENST00000636953 945 ntBASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 ZNF815P-204ENST00000434898 1737 ntBASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SND1-IT1Q9HBX3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
SND1-IT1Q9HBX3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC12.65□□□□□ -0.39
SND1-IT1Q9HBX3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC12.65□□□□□ -0.39
SND1-IT1Q9HBX3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 AC067852.2-201ENST00000590513 2313 ntBASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms