Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 UBE2SP1-201ENST00000450587 669 ntBASIC18.07■□□□□ 0.48
BRF2Q9HAW0 AC008040.2-201ENST00000461049 708 ntBASIC18.07■□□□□ 0.48
BRF2Q9HAW0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 GCSHP5-201ENST00000443090 522 ntBASIC18.06■□□□□ 0.48
BRF2Q9HAW0 AC098590.1-201ENST00000468126 897 ntBASIC18.06■□□□□ 0.48
BRF2Q9HAW0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 CD177P1-201ENST00000606252 935 ntBASIC18.06■□□□□ 0.48
BRF2Q9HAW0 AP000692.2-201ENST00000608391 879 ntBASIC18.06■□□□□ 0.48
BRF2Q9HAW0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.06■□□□□ 0.48
BRF2Q9HAW0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRF2Q9HAW0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 AC090164.3-201ENST00000610780 2143 ntBASIC18.05■□□□□ 0.48
BRF2Q9HAW0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 MESTP1-201ENST00000404287 994 ntBASIC18.05■□□□□ 0.48
BRF2Q9HAW0 FAM197Y1-201ENST00000421178 764 ntBASIC18.05■□□□□ 0.48
BRF2Q9HAW0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 AP001412.1-201ENST00000608405 714 ntBASIC18.05■□□□□ 0.48
BRF2Q9HAW0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.05■□□□□ 0.48
BRF2Q9HAW0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRF2Q9HAW0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 MTMR9LP-203ENST00000426597 1545 ntBASIC18.04■□□□□ 0.48
BRF2Q9HAW0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRF2Q9HAW0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms