Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
VPS11Q9H270 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
VPS11Q9H270 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
VPS11Q9H270 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VPS11Q9H270 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS11Q9H270 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
VPS11Q9H270 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
VPS11Q9H270 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.01■□□□□ 0.63
VPS11Q9H270 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS11Q9H270 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS11Q9H270 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS11Q9H270 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
VPS11Q9H270 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS11Q9H270 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.01■□□□□ 0.63
VPS11Q9H270 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.01■□□□□ 0.63
VPS11Q9H270 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS11Q9H270 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.01■□□□□ 0.63
VPS11Q9H270 AC008687.6-201ENST00000596318 630 ntBASIC19.01■□□□□ 0.63
VPS11Q9H270 AC083880.1-201ENST00000608266 535 ntBASIC19.01■□□□□ 0.63
VPS11Q9H270 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.01■□□□□ 0.63
VPS11Q9H270 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS11Q9H270 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS11Q9H270 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS11Q9H270 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS11Q9H270 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
VPS11Q9H270 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS11Q9H270 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS11Q9H270 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VPS11Q9H270 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS11Q9H270 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VPS11Q9H270 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.01■□□□□ 0.63
VPS11Q9H270 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
VPS11Q9H270 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS11Q9H270 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19■□□□□ 0.63
VPS11Q9H270 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS11Q9H270 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19■□□□□ 0.63
VPS11Q9H270 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
VPS11Q9H270 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS11Q9H270 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VPS11Q9H270 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19■□□□□ 0.63
VPS11Q9H270 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
VPS11Q9H270 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19■□□□□ 0.63
VPS11Q9H270 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19■□□□□ 0.63
VPS11Q9H270 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
VPS11Q9H270 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19■□□□□ 0.63
VPS11Q9H270 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
VPS11Q9H270 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19■□□□□ 0.63
VPS11Q9H270 MIR935-201ENST00000401179 91 ntBASIC19■□□□□ 0.63
VPS11Q9H270 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
VPS11Q9H270 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
VPS11Q9H270 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19■□□□□ 0.63
VPS11Q9H270 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
VPS11Q9H270 AL138781.1-201ENST00000566567 1274 ntBASIC19■□□□□ 0.63
VPS11Q9H270 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19■□□□□ 0.63
VPS11Q9H270 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19■□□□□ 0.63
VPS11Q9H270 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
VPS11Q9H270 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19■□□□□ 0.63
VPS11Q9H270 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS11Q9H270 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19■□□□□ 0.63
VPS11Q9H270 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19■□□□□ 0.63
VPS11Q9H270 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
VPS11Q9H270 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19■□□□□ 0.63
VPS11Q9H270 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS11Q9H270 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19■□□□□ 0.63
VPS11Q9H270 LTB4R2-202ENST00000528054 3092 ntBASIC19■□□□□ 0.63
VPS11Q9H270 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
VPS11Q9H270 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS11Q9H270 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VPS11Q9H270 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19■□□□□ 0.63
VPS11Q9H270 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS11Q9H270 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS11Q9H270 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS11Q9H270 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS11Q9H270 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
VPS11Q9H270 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.99■□□□□ 0.63
VPS11Q9H270 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS11Q9H270 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VPS11Q9H270 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.99■□□□□ 0.63
VPS11Q9H270 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VPS11Q9H270 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VPS11Q9H270 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.99■□□□□ 0.63
VPS11Q9H270 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.99■□□□□ 0.63
VPS11Q9H270 AC083906.6-201ENST00000641366 219 ntBASIC18.99■□□□□ 0.63
VPS11Q9H270 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS11Q9H270 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS11Q9H270 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.99■□□□□ 0.63
VPS11Q9H270 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.99■□□□□ 0.63
VPS11Q9H270 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS11Q9H270 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VPS11Q9H270 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.99■□□□□ 0.63
VPS11Q9H270 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
VPS11Q9H270 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.99■□□□□ 0.63
VPS11Q9H270 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.99■□□□□ 0.63
VPS11Q9H270 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS11Q9H270 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS11Q9H270 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS11Q9H270 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS11Q9H270 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VPS11Q9H270 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
VPS11Q9H270 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms