Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.84■□□□□ 0.29
USB1Q9BQ65 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USB1Q9BQ65 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USB1Q9BQ65 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USB1Q9BQ65 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
USB1Q9BQ65 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
USB1Q9BQ65 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.84■□□□□ 0.29
USB1Q9BQ65 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.84■□□□□ 0.29
USB1Q9BQ65 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
USB1Q9BQ65 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.84■□□□□ 0.29
USB1Q9BQ65 AC092865.7-201ENST00000641832 219 ntBASIC16.84■□□□□ 0.29
USB1Q9BQ65 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USB1Q9BQ65 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USB1Q9BQ65 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
USB1Q9BQ65 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USB1Q9BQ65 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.84■□□□□ 0.29
USB1Q9BQ65 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USB1Q9BQ65 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USB1Q9BQ65 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
USB1Q9BQ65 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.83■□□□□ 0.29
USB1Q9BQ65 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
USB1Q9BQ65 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USB1Q9BQ65 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USB1Q9BQ65 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.83■□□□□ 0.28
USB1Q9BQ65 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USB1Q9BQ65 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.83■□□□□ 0.28
USB1Q9BQ65 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
USB1Q9BQ65 MFAP1P1-201ENST00000442257 1255 ntBASIC16.83■□□□□ 0.28
USB1Q9BQ65 TSPY17P-201ENST00000450329 467 ntBASIC16.83■□□□□ 0.28
USB1Q9BQ65 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
USB1Q9BQ65 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
USB1Q9BQ65 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.83■□□□□ 0.28
USB1Q9BQ65 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.83■□□□□ 0.28
USB1Q9BQ65 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USB1Q9BQ65 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
USB1Q9BQ65 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.83■□□□□ 0.28
USB1Q9BQ65 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USB1Q9BQ65 AC010653.2-201ENST00000623505 997 ntBASIC16.83■□□□□ 0.28
USB1Q9BQ65 AL139384.1-201ENST00000612143 3047 ntBASIC16.83■□□□□ 0.28
USB1Q9BQ65 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USB1Q9BQ65 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USB1Q9BQ65 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 AC113347.1-201ENST00000413321 391 ntBASIC16.82■□□□□ 0.28
USB1Q9BQ65 AL390955.1-201ENST00000428694 934 ntBASIC16.82■□□□□ 0.28
USB1Q9BQ65 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.82■□□□□ 0.28
USB1Q9BQ65 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USB1Q9BQ65 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
USB1Q9BQ65 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
USB1Q9BQ65 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
USB1Q9BQ65 CYP2D8P-201ENST00000433633 1490 ntBASIC16.81■□□□□ 0.28
USB1Q9BQ65 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.81■□□□□ 0.28
USB1Q9BQ65 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 NEFHP1-201ENST00000412845 2629 ntBASIC16.81■□□□□ 0.28
USB1Q9BQ65 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.81■□□□□ 0.28
USB1Q9BQ65 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.81■□□□□ 0.28
USB1Q9BQ65 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
USB1Q9BQ65 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USB1Q9BQ65 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
USB1Q9BQ65 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
USB1Q9BQ65 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms