Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.82■□□□□ 0.76
SMOQ99835 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.82■□□□□ 0.76
SMOQ99835 AC010331.1-201ENST00000611423 582 ntBASIC19.82■□□□□ 0.76
SMOQ99835 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 AL023973.1-201ENST00000624619 620 ntBASIC19.82■□□□□ 0.76
SMOQ99835 AC068587.9-201ENST00000641814 219 ntBASIC19.82■□□□□ 0.76
SMOQ99835 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.82■□□□□ 0.76
SMOQ99835 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.82■□□□□ 0.76
SMOQ99835 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SMOQ99835 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.82■□□□□ 0.76
SMOQ99835 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMOQ99835 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SMOQ99835 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMOQ99835 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SMOQ99835 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMOQ99835 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SMOQ99835 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMOQ99835 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMOQ99835 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.81■□□□□ 0.76
SMOQ99835 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SMOQ99835 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMOQ99835 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMOQ99835 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMOQ99835 YBX1P2-201ENST00000489612 999 ntBASIC19.81■□□□□ 0.76
SMOQ99835 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.81■□□□□ 0.76
SMOQ99835 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SMOQ99835 AC011558.1-201ENST00000623459 338 ntBASIC19.81■□□□□ 0.76
SMOQ99835 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMOQ99835 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.81■□□□□ 0.76
SMOQ99835 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMOQ99835 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMOQ99835 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.8■□□□□ 0.76
SMOQ99835 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMOQ99835 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SMOQ99835 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMOQ99835 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMOQ99835 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMOQ99835 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.8■□□□□ 0.76
SMOQ99835 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.8■□□□□ 0.76
SMOQ99835 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMOQ99835 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.8■□□□□ 0.76
SMOQ99835 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMOQ99835 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMOQ99835 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SMOQ99835 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SMOQ99835 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
SMOQ99835 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.8■□□□□ 0.76
SMOQ99835 AK4P3-201ENST00000418260 669 ntBASIC19.8■□□□□ 0.76
SMOQ99835 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
SMOQ99835 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.8■□□□□ 0.76
SMOQ99835 AL049597.2-201ENST00000565575 961 ntBASIC19.8■□□□□ 0.76
SMOQ99835 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SMOQ99835 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.8■□□□□ 0.76
SMOQ99835 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.8■□□□□ 0.76
SMOQ99835 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.8■□□□□ 0.76
SMOQ99835 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.8■□□□□ 0.76
SMOQ99835 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMOQ99835 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMOQ99835 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SMOQ99835 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
SMOQ99835 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMOQ99835 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMOQ99835 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMOQ99835 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMOQ99835 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.79■□□□□ 0.76
SMOQ99835 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMOQ99835 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMOQ99835 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMOQ99835 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.79■□□□□ 0.76
SMOQ99835 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMOQ99835 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SMOQ99835 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMOQ99835 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMOQ99835 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.79■□□□□ 0.76
SMOQ99835 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMOQ99835 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.79■□□□□ 0.76
SMOQ99835 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.79■□□□□ 0.76
SMOQ99835 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMOQ99835 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.79■□□□□ 0.76
SMOQ99835 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.79■□□□□ 0.76
SMOQ99835 AL441883.1-201ENST00000566170 1045 ntBASIC19.79■□□□□ 0.76
SMOQ99835 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.79■□□□□ 0.76
SMOQ99835 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMOQ99835 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.79■□□□□ 0.76
SMOQ99835 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMOQ99835 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMOQ99835 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SMOQ99835 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMOQ99835 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SMOQ99835 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.78■□□□□ 0.76
SMOQ99835 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SMOQ99835 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMOQ99835 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMOQ99835 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.78■□□□□ 0.76
SMOQ99835 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.78■□□□□ 0.76
SMOQ99835 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.78■□□□□ 0.76
SMOQ99835 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.78■□□□□ 0.76
SMOQ99835 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms