Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 BRWD1-AS2-201ENST00000603064 1028 ntBASIC12.58□□□□□ -0.4
LITAFQ99732 TFG-210ENST00000620299 1289 ntTSL 5 BASIC12.58□□□□□ -0.4
LITAFQ99732 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC12.58□□□□□ -0.4
LITAFQ99732 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LITAFQ99732 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LITAFQ99732 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LITAFQ99732 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
LITAFQ99732 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
LITAFQ99732 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC12.58□□□□□ -0.4
LITAFQ99732 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
LITAFQ99732 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LITAFQ99732 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LITAFQ99732 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.57□□□□□ -0.4
LITAFQ99732 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
LITAFQ99732 GCK-205ENST00000437084 1385 ntTSL 5 BASIC12.57□□□□□ -0.4
LITAFQ99732 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
LITAFQ99732 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
LITAFQ99732 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.57□□□□□ -0.4
LITAFQ99732 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC12.57□□□□□ -0.4
LITAFQ99732 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 MIR939-201ENST00000401314 82 ntBASIC12.57□□□□□ -0.4
LITAFQ99732 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC12.57□□□□□ -0.4
LITAFQ99732 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 NME1-207ENST00000480143 964 ntTSL 2 BASIC12.57□□□□□ -0.4
LITAFQ99732 TESC-206ENST00000541210 936 ntTSL 3 BASIC12.57□□□□□ -0.4
LITAFQ99732 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC12.57□□□□□ -0.4
LITAFQ99732 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
LITAFQ99732 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.57□□□□□ -0.4
LITAFQ99732 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.57□□□□□ -0.4
LITAFQ99732 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 AL118508.1-201ENST00000613502 2345 ntBASIC12.57□□□□□ -0.4
LITAFQ99732 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
LITAFQ99732 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC12.57□□□□□ -0.4
LITAFQ99732 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
LITAFQ99732 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 AC018695.7-201ENST00000624587 2492 ntBASIC12.56□□□□□ -0.4
LITAFQ99732 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.56□□□□□ -0.4
LITAFQ99732 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.56□□□□□ -0.4
LITAFQ99732 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LITAFQ99732 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC12.56□□□□□ -0.4
LITAFQ99732 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LITAFQ99732 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
LITAFQ99732 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC12.56□□□□□ -0.4
LITAFQ99732 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC12.56□□□□□ -0.4
LITAFQ99732 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.56□□□□□ -0.4
LITAFQ99732 HTR7P1-202ENST00000624664 4411 ntBASIC12.56□□□□□ -0.4
LITAFQ99732 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.56□□□□□ -0.4
LITAFQ99732 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LITAFQ99732 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.56□□□□□ -0.4
LITAFQ99732 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
LITAFQ99732 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
LITAFQ99732 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC12.56□□□□□ -0.4
LITAFQ99732 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC12.56□□□□□ -0.4
LITAFQ99732 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LITAFQ99732 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms