Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 RCN1P1-201ENST00000400413 996 ntBASIC19.46■□□□□ 0.71
RPRD1AQ96P16 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 AL049812.1-201ENST00000432563 2267 ntBASIC19.46■□□□□ 0.71
RPRD1AQ96P16 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.46■□□□□ 0.71
RPRD1AQ96P16 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 KRT18P57-201ENST00000443599 1254 ntBASIC19.45■□□□□ 0.7
RPRD1AQ96P16 MIR4674-201ENST00000582457 87 ntBASIC19.45■□□□□ 0.7
RPRD1AQ96P16 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPRD1AQ96P16 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 GPAT2P1-201ENST00000444924 1672 ntBASIC19.44■□□□□ 0.7
RPRD1AQ96P16 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPRD1AQ96P16 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 AL512353.2-201ENST00000448759 1962 ntBASIC19.43■□□□□ 0.7
RPRD1AQ96P16 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 FAM210CP-201ENST00000445714 574 ntBASIC19.43■□□□□ 0.7
RPRD1AQ96P16 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 AL512604.3-201ENST00000569583 964 ntBASIC19.43■□□□□ 0.7
RPRD1AQ96P16 RN7SL850P-201ENST00000579959 291 ntBASIC19.43■□□□□ 0.7
RPRD1AQ96P16 AC092865.7-201ENST00000641832 219 ntBASIC19.43■□□□□ 0.7
RPRD1AQ96P16 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
RPRD1AQ96P16 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 AL023284.2-201ENST00000405850 579 ntBASIC19.42■□□□□ 0.7
RPRD1AQ96P16 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms