Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RITA1Q96K30 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RITA1Q96K30 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RITA1Q96K30 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.17■□□□□ 0.02
RITA1Q96K30 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.17■□□□□ 0.02
RITA1Q96K30 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RITA1Q96K30 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.17■□□□□ 0.02
RITA1Q96K30 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RITA1Q96K30 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RITA1Q96K30 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.17■□□□□ 0.02
RITA1Q96K30 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RITA1Q96K30 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.17■□□□□ 0.02
RITA1Q96K30 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.17■□□□□ 0.02
RITA1Q96K30 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RITA1Q96K30 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RITA1Q96K30 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RITA1Q96K30 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
RITA1Q96K30 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RITA1Q96K30 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RITA1Q96K30 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
RITA1Q96K30 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RITA1Q96K30 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.16■□□□□ 0.02
RITA1Q96K30 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RITA1Q96K30 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.16■□□□□ 0.02
RITA1Q96K30 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RITA1Q96K30 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RITA1Q96K30 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.16■□□□□ 0.02
RITA1Q96K30 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.16■□□□□ 0.02
RITA1Q96K30 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RITA1Q96K30 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.16■□□□□ 0.02
RITA1Q96K30 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RITA1Q96K30 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RITA1Q96K30 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RITA1Q96K30 CRYGFP-201ENST00000418459 633 ntBASIC15.16■□□□□ 0.02
RITA1Q96K30 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.16■□□□□ 0.02
RITA1Q96K30 MFAP1P1-201ENST00000442257 1255 ntBASIC15.16■□□□□ 0.02
RITA1Q96K30 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RITA1Q96K30 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RITA1Q96K30 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.16■□□□□ 0.02
RITA1Q96K30 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.16■□□□□ 0.02
RITA1Q96K30 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RITA1Q96K30 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.16■□□□□ 0.02
RITA1Q96K30 AC066615.1-201ENST00000640911 628 ntBASIC15.16■□□□□ 0.02
RITA1Q96K30 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RITA1Q96K30 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RITA1Q96K30 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
RITA1Q96K30 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RITA1Q96K30 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RITA1Q96K30 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RITA1Q96K30 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RITA1Q96K30 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RITA1Q96K30 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.16■□□□□ 0.02
RITA1Q96K30 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RITA1Q96K30 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.16■□□□□ 0.02
RITA1Q96K30 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.16■□□□□ 0.02
RITA1Q96K30 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.15■□□□□ 0.02
RITA1Q96K30 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RITA1Q96K30 AC104581.1-202ENST00000635932 2618 ntBASIC15.15■□□□□ 0.02
RITA1Q96K30 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 AC079598.2-202ENST00000546624 1451 ntBASIC15.15■□□□□ 0.02
RITA1Q96K30 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.15■□□□□ 0.02
RITA1Q96K30 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.15■□□□□ 0.02
RITA1Q96K30 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.15■□□□□ 0.02
RITA1Q96K30 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.15■□□□□ 0.02
RITA1Q96K30 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.15■□□□□ 0.02
RITA1Q96K30 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 RBM17P1-201ENST00000453646 1190 ntBASIC15.15■□□□□ 0.02
RITA1Q96K30 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.15■□□□□ 0.02
RITA1Q96K30 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.15■□□□□ 0.02
RITA1Q96K30 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.15■□□□□ 0.02
RITA1Q96K30 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.15■□□□□ 0.02
RITA1Q96K30 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.15■□□□□ 0.02
RITA1Q96K30 AC008622.2-201ENST00000617006 1229 ntBASIC15.15■□□□□ 0.02
RITA1Q96K30 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RITA1Q96K30 AC083906.6-201ENST00000641366 219 ntBASIC15.15■□□□□ 0.02
RITA1Q96K30 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
RITA1Q96K30 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.15■□□□□ 0.02
RITA1Q96K30 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RITA1Q96K30 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RITA1Q96K30 AL138781.2-201ENST00000617896 1843 ntBASIC15.15■□□□□ 0.02
RITA1Q96K30 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.15■□□□□ 0.02
RITA1Q96K30 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RITA1Q96K30 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RITA1Q96K30 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RITA1Q96K30 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.14■□□□□ 0.01
RITA1Q96K30 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RITA1Q96K30 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RITA1Q96K30 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms