Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDLIM5Q96HC4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 AC090164.3-201ENST00000610780 2143 ntBASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM5Q96HC4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
PDLIM5Q96HC4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
PDLIM5Q96HC4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.46■□□□□ 0.54
PDLIM5Q96HC4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.46■□□□□ 0.54
PDLIM5Q96HC4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
PDLIM5Q96HC4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM5Q96HC4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 Z99916.2-201ENST00000604037 246 ntBASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 AC073592.3-201ENST00000625118 1834 ntBASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM5Q96HC4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms