Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 AP000523.1-201ENST00000398242 1049 ntBASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 AC117947.1-201ENST00000427448 529 ntBASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SMARCD1Q96GM5 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 MIR1224-201ENST00000408193 85 ntBASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 AC104076.2-201ENST00000448912 469 ntBASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 AL049597.2-201ENST00000565575 961 ntBASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 NEK4P2-201ENST00000580004 1012 ntBASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCD1Q96GM5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 AL049812.1-201ENST00000432563 2267 ntBASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 AK4P3-201ENST00000418260 669 ntBASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 DUX4L26-201ENST00000489078 1255 ntBASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 YBX1P2-201ENST00000489612 999 ntBASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 AC139887.4-201ENST00000607877 719 ntBASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 AC010331.1-201ENST00000611423 582 ntBASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 AL031432.5-201ENST00000641059 760 ntBASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCD1Q96GM5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCD1Q96GM5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCD1Q96GM5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SMARCD1Q96GM5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms