Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 AC104417.2-201ENST00000562989 1793 ntBASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 AC013268.1-206ENST00000638368 961 ntBASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 AC112229.1-201ENST00000639295 961 ntBASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.02■□□□□ 0.64
CHMP6Q96FZ7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.02■□□□□ 0.63
CHMP6Q96FZ7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP6Q96FZ7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
CHMP6Q96FZ7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP6Q96FZ7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHMP6Q96FZ7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 AC116351.2-201ENST00000606540 1585 ntBASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CHMP6Q96FZ7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP6Q96FZ7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP6Q96FZ7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP6Q96FZ7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP6Q96FZ7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP6Q96FZ7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP6Q96FZ7 MIR935-201ENST00000401179 91 ntBASIC19■□□□□ 0.63
CHMP6Q96FZ7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 AC023632.3-201ENST00000521633 145 ntBASIC19■□□□□ 0.63
CHMP6Q96FZ7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 MFSD11-216ENST00000590393 1141 ntBASIC19■□□□□ 0.63
CHMP6Q96FZ7 AC011767.1-201ENST00000617410 1153 ntBASIC19■□□□□ 0.63
CHMP6Q96FZ7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP6Q96FZ7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP6Q96FZ7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP6Q96FZ7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP6Q96FZ7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP6Q96FZ7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CHMP6Q96FZ7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP6Q96FZ7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms